RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 PDZK1Q5T2W1 519 aa14.5□□□□□ -0.09
CTNS-202ENST00000381870 CCNJQ5T5M9 372 aa14.5□□□□□ -0.09
CTNS-202ENST00000381870 NOTUMQ6P988 496 aa14.5□□□□□ -0.09
CTNS-202ENST00000381870 RGL4Q8IZJ4 473 aa14.5□□□□□ -0.09
CTNS-202ENST00000381870 SLC5A8Q8N695 610 aa14.5□□□□□ -0.09
CTNS-202ENST00000381870 SCAMP5Q8TAC9 235 aa14.5□□□□□ -0.09
CTNS-202ENST00000381870 GPR152Q8TDT2 470 aa14.5□□□□□ -0.09
CTNS-202ENST00000381870 POP5Q969H6 163 aaKnown RBP14.5□□□□□ -0.09
CTNS-202ENST00000381870 SEMA3CQ99985 751 aa14.5□□□□□ -0.09
CTNS-202ENST00000381870 GTPBP2Q9BX10 602 aaKnown RBP14.5□□□□□ -0.09
CTNS-202ENST00000381870 SPATC1LQ9H0A9 340 aa14.5□□□□□ -0.09
CTNS-202ENST00000381870 LRTM1Q9HBL6 345 aa14.5□□□□□ -0.09
CTNS-202ENST00000381870 EVA1BQ9NVM1 165 aa14.5□□□□□ -0.09
CTNS-202ENST00000381870 MCUBQ9NWR8 336 aa14.5□□□□□ -0.09
CTNS-202ENST00000381870 FNDC3AQ9Y2H6 1198 aaKnown RBP14.5□□□□□ -0.09
CTNS-202ENST00000381870 PCDHGA2Q9Y5H1 932 aa14.5□□□□□ -0.09
CTNS-202ENST00000381870 CLCA3PQ9Y6N3 262 aa14.5□□□□□ -0.09
CTNS-202ENST00000381870 MICAL3Q7RTP6 2002 aa14.5□□□□□ -0.09
CTNS-202ENST00000381870 FABP12A6NFH5 140 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 WWP2O00308 870 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 CYP17A1P05093 508 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 S100A3P33764 101 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 GDF5P43026 501 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 CTSL3PQ5NE16 218 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 PLET1Q6UQ28 207 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 ZZZ3Q8IYH5 903 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 FAM181AQ8N9Y4 354 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 ARRDC4Q8NCT1 418 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 OSMRQ99650 979 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 ABHD16BQ9H3Z7 469 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 ING3Q9NXR8 418 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 RPS6KA6Q9UK32 745 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 OGDHLQ9ULD0 1010 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 DUSP12Q9UNI6 340 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 COMMD10Q9Y6G5 202 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 NUP214P35658 2090 aaPredicted RBP14.49□□□□□ -0.09
CTNS-202ENST00000381870 A8MX80 341 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 EPN2O95208 641 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 GUCA1CO95843 209 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 OTCP00480 354 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 RPS3P23396 243 aaKnown RBP eCLIP14.49□□□□□ -0.09
CTNS-202ENST00000381870 BRCC3P46736 316 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 RUNX1T1Q06455 604 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 MAD2L1Q13257 205 aaPredicted RBP14.49□□□□□ -0.09
CTNS-202ENST00000381870 ZNF267Q14586 743 aaPredicted RBP14.49□□□□□ -0.09
CTNS-202ENST00000381870 VMACQ2NL98 169 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 PYDC2Q56P42 97 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 ZBTB37Q5TC79 503 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 OVOS1Q6IE37 1185 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 TMEM65Q6PI78 240 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 PIANPQ8IYJ0 282 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 GALNT6Q8NCL4 622 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 TADA1Q96BN2 335 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 DIRAS2Q96HU8 199 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 SMIM14Q96QK8 99 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 EPYCQ99645 322 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 NIPSNAP1Q9BPW8 284 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 HACL1Q9UJ83 578 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 MAN2B2Q9Y2E5 1009 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 DLGAP4Q9Y2H0 992 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 GBF1Q92538 1859 aa14.49□□□□□ -0.09
CTNS-202ENST00000381870 ATP6V1G2-DDX39BF2Z307 99 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 LRATO95237 230 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 KCNK5O95279 499 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 TSPAN19P0C672 248 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 PKMP14618 531 aaKnown RBP14.48□□□□□ -0.09
CTNS-202ENST00000381870 EVI2BP34910 448 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 CSTF3Q12996 717 aaKnown RBP14.48□□□□□ -0.09
CTNS-202ENST00000381870 LARS2Q15031 903 aaKnown RBP14.48□□□□□ -0.09
CTNS-202ENST00000381870 PCBP2Q15366 365 aaKnown RBP eCLIP14.48□□□□□ -0.09
CTNS-202ENST00000381870 CBLL1Q75N03 491 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 EIF3MQ7L2H7 374 aaKnown RBP14.48□□□□□ -0.09
CTNS-202ENST00000381870 OR4K2Q8NGD2 314 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 OR52J3Q8NH60 311 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 MSANTD3Q96H12 275 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 C7orf34Q96L11 122 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 SENP8Q96LD8 212 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 CDCA4Q9BXL8 241 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 NSUN3Q9H649 340 aaKnown RBP14.48□□□□□ -0.09
CTNS-202ENST00000381870 TMLHEQ9NVH6 421 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 PPT2Q9UMR5 302 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 A0A1W2PQL4 384 aaPredicted RBP14.48□□□□□ -0.09
CTNS-202ENST00000381870 LINC00862A6NCI5 91 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 WASHC1A8K0Z3 465 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 RFXANKO14593 260 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 SLC22A5O76082 557 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 CKMT1AP12532 417 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 TNNI3P19429 210 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 TTLL9Q3SXZ7 439 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 PSAPL1Q6NUJ1 521 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 MSANTD2Q6P1R3 559 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 FAM122CQ6P4D5 195 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 SAMD7Q7Z3H4 446 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 OR8H3Q8N146 312 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 C9orf62Q8N4C0 152 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 LPCAT1Q8NF37 534 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 BTN2A2Q8WVV5 523 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 TSSK3Q96PN8 268 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 GFM1Q96RP9 751 aaKnown RBP14.48□□□□□ -0.09
CTNS-202ENST00000381870 MRPL9Q9BYD2 267 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms