RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 PAQR3Q6TCH7 311 aa13.41□□□□□ -0.26
SHOX-202ENST00000381575 C2CD4AQ8NCU7 369 aaPredicted RBP13.41□□□□□ -0.26
SHOX-202ENST00000381575 GRK7Q8WTQ7 553 aa13.41□□□□□ -0.26
SHOX-202ENST00000381575 FAR1Q8WVX9 515 aa13.41□□□□□ -0.26
SHOX-202ENST00000381575 LINGO1Q96FE5 620 aa13.41□□□□□ -0.26
SHOX-202ENST00000381575 RBCK1Q9BYM8 510 aa13.41□□□□□ -0.26
SHOX-202ENST00000381575 VN1R1Q9GZP7 353 aa13.41□□□□□ -0.26
SHOX-202ENST00000381575 TRMT1Q9NXH9 659 aaKnown RBP13.41□□□□□ -0.26
SHOX-202ENST00000381575 COMMD10Q9Y6G5 202 aa13.41□□□□□ -0.26
SHOX-202ENST00000381575 GOLGA6L10A0A0M3HER8 536 aa13.4□□□□□ -0.26
SHOX-202ENST00000381575 WIPF3A6NGB9 483 aa13.4□□□□□ -0.26
SHOX-202ENST00000381575 ZNF860A6NHJ4 632 aa13.4□□□□□ -0.26
SHOX-202ENST00000381575 DNALI1O14645 258 aaPredicted RBP13.4□□□□□ -0.26
SHOX-202ENST00000381575 LRRTM2O43300 516 aa13.4□□□□□ -0.26
SHOX-202ENST00000381575 LCMT2O60294 686 aaKnown RBP13.4□□□□□ -0.26
SHOX-202ENST00000381575 BMP10O95393 424 aa13.4□□□□□ -0.26
SHOX-202ENST00000381575 SERPINA7P05543 415 aa13.4□□□□□ -0.26
SHOX-202ENST00000381575 CDH1P12830 882 aa13.4□□□□□ -0.26
SHOX-202ENST00000381575 AVPR1BP47901 424 aa13.4□□□□□ -0.26
SHOX-202ENST00000381575 CSNK1G2P78368 415 aa13.4□□□□□ -0.26
SHOX-202ENST00000381575 MEF2AQ02078 507 aaPredicted RBP13.4□□□□□ -0.26
SHOX-202ENST00000381575 NDUFA9Q16795 377 aa13.4□□□□□ -0.26
SHOX-202ENST00000381575 MINDY4Q4G0A6 757 aa13.4□□□□□ -0.26
SHOX-202ENST00000381575 AGTRAPQ6RW13 159 aa13.4□□□□□ -0.26
SHOX-202ENST00000381575 FAM180AQ6UWF9 173 aa13.4□□□□□ -0.26
SHOX-202ENST00000381575 KCT2Q8NC54 265 aa13.4□□□□□ -0.26
SHOX-202ENST00000381575 ACTRT1Q8TDG2 376 aa13.4□□□□□ -0.26
SHOX-202ENST00000381575 PYCR2Q96C36 320 aa13.4□□□□□ -0.26
SHOX-202ENST00000381575 CFAP36Q96G28 342 aa13.4□□□□□ -0.26
SHOX-202ENST00000381575 LMF1Q96S06 567 aa13.4□□□□□ -0.26
SHOX-202ENST00000381575 EBNA1BP2Q99848 306 aaKnown RBP13.4□□□□□ -0.26
SHOX-202ENST00000381575 TGIF2Q9GZN2 237 aa13.4□□□□□ -0.26
SHOX-202ENST00000381575 ZNF700Q9H0M5 742 aa13.4□□□□□ -0.26
SHOX-202ENST00000381575 PLAC1Q9HBJ0 212 aa13.4□□□□□ -0.26
SHOX-202ENST00000381575 TMEM184CQ9NVA4 438 aa13.4□□□□□ -0.26
SHOX-202ENST00000381575 RIC8BQ9NVN3 520 aa13.4□□□□□ -0.26
SHOX-202ENST00000381575 DYTNA2CJ06 578 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 TXNDC9O14530 226 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 RDH16O75452 317 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 WFS1O76024 890 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 WDPCPO95876 746 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 AHSGP02765 367 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 C8orf89P0DMQ9 161 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 DCTP40126 519 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 XCR1P46094 333 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 TNFSF10P50591 281 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 KCNK10P57789 538 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 RPS15AP62244 130 aaKnown RBP13.39□□□□□ -0.27
SHOX-202ENST00000381575 PTK6Q13882 451 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 FAM53BQ14153 422 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 ZXDCQ2QGD7 858 aaPredicted RBP13.39□□□□□ -0.27
SHOX-202ENST00000381575 FCRLBQ6BAA4 426 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 TMEM205Q6UW68 189 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 SLC26A11Q86WA9 606 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 C17orf64Q86WR6 236 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 PDSS2Q86YH6 399 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 LURAP1LQ8IV03 231 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 LMNTD2Q8IXW0 634 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 MYO1HQ8N1T3 1032 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 GPATCH11Q8N954 259 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 OR51Q1Q8NH59 317 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 MCOLN3Q8TDD5 553 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 TAAR6Q96RI8 345 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.39□□□□□ -0.27
SHOX-202ENST00000381575 PPANQ9NQ55 473 aaKnown RBP13.39□□□□□ -0.27
SHOX-202ENST00000381575 OLAHQ9NV23 265 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 TAS2R13Q9NYV9 303 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 SNX12Q9UMY4 172 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 CHMP2BQ9UQN3 213 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 PKDREJQ9NTG1 2253 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 GTF3C1Q12789 2109 aa13.39□□□□□ -0.27
SHOX-202ENST00000381575 APCP25054 2843 aa13.38□□□□□ -0.27
SHOX-202ENST00000381575 LOC102723996A0A087X1L8 192 aa13.38□□□□□ -0.27
SHOX-202ENST00000381575 A0A1W2PQ72 361 aa13.38□□□□□ -0.27
SHOX-202ENST00000381575 CDC123O75794 336 aaPredicted RBP13.38□□□□□ -0.27
SHOX-202ENST00000381575 NSA2O95478 260 aaKnown RBP13.38□□□□□ -0.27
SHOX-202ENST00000381575 B3GALT4O96024 378 aa13.38□□□□□ -0.27
SHOX-202ENST00000381575 C8GP07360 202 aa13.38□□□□□ -0.27
SHOX-202ENST00000381575 EDN3P14138 238 aa13.38□□□□□ -0.27
SHOX-202ENST00000381575 RGS4P49798 205 aa13.38□□□□□ -0.27
SHOX-202ENST00000381575 RELAQ04206 551 aa13.38□□□□□ -0.27
SHOX-202ENST00000381575 ZNF33BQ06732 778 aa13.38□□□□□ -0.27
SHOX-202ENST00000381575 C1QL3Q5VWW1 255 aa13.38□□□□□ -0.27
SHOX-202ENST00000381575 TMEM214Q6NUQ4 689 aaKnown RBP13.38□□□□□ -0.27
SHOX-202ENST00000381575 HIBCHQ6NVY1 386 aaPredicted RBP13.38□□□□□ -0.27
SHOX-202ENST00000381575 TRMT10BQ6PF06 316 aaKnown RBP13.38□□□□□ -0.27
SHOX-202ENST00000381575 PALM2Q8IXS6 379 aa13.38□□□□□ -0.27
SHOX-202ENST00000381575 MOCOSQ96EN8 888 aa13.38□□□□□ -0.27
SHOX-202ENST00000381575 CAPZA3Q96KX2 299 aa13.38□□□□□ -0.27
SHOX-202ENST00000381575 SLX1AQ9BQ83 275 aa13.38□□□□□ -0.27
SHOX-202ENST00000381575 WDR83Q9BRX9 315 aaKnown RBP13.38□□□□□ -0.27
SHOX-202ENST00000381575 KCNF1Q9H3M0 494 aa13.38□□□□□ -0.27
SHOX-202ENST00000381575 PARVBQ9HBI1 364 aa13.38□□□□□ -0.27
SHOX-202ENST00000381575 IKZF3Q9UKT9 509 aa13.38□□□□□ -0.27
SHOX-202ENST00000381575 CSMD1Q96PZ7 3565 aa13.37□□□□□ -0.27
SHOX-202ENST00000381575 A8MUI8 341 aa13.37□□□□□ -0.27
SHOX-202ENST00000381575 EIF3FO00303 357 aaPredicted RBP13.37□□□□□ -0.27
SHOX-202ENST00000381575 ZG16O60844 167 aa13.37□□□□□ -0.27
SHOX-202ENST00000381575 TSPAN12O95859 305 aa13.37□□□□□ -0.27
SHOX-202ENST00000381575 PMP22Q01453 160 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms