RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 ITGB1BP2Q9UKP3 347 aa12.18□□□□□ -0.46
VPS16-202ENST00000380445 GRXCR1A8MXD5 290 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 BOLA2-SMG1P6H3BVE0 249 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 PI15O43692 258 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 SNAP29O95721 258 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 ALPLP05186 524 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 MYCLP1P12525 358 aaPredicted RBP12.17□□□□□ -0.46
VPS16-202ENST00000380445 NPPBP16860 134 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 ZNF8P17098 575 aaPredicted RBP12.17□□□□□ -0.46
VPS16-202ENST00000380445 ENGP17813 658 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 GPX2P18283 190 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 P2RY2P41231 377 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 ALDH3B2P48448 385 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 ESRRGP62508 458 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 ADARB1P78563 741 aaKnown RBP12.17□□□□□ -0.46
VPS16-202ENST00000380445 RUNX3Q13761 415 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 USP51Q70EK9 711 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 PGBD3Q8N328 593 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 ZCCHC7Q8N3Z6 543 aaKnown RBP12.17□□□□□ -0.46
VPS16-202ENST00000380445 FAM86B1Q8N7N1 296 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 CDC26Q8NHZ8 85 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 SNX19Q92543 992 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 RAD51AP1Q96B01 352 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 SPATA9Q9BWV2 254 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 LMAN2LQ9H0V9 348 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 TIMMDC1Q9NPL8 285 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 CCDC177Q9NQR7 707 aaPredicted RBP12.17□□□□□ -0.46
VPS16-202ENST00000380445 SIRT5Q9NXA8 310 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 BTNL2Q9UIR0 455 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 TDRKHQ9Y2W6 561 aaKnown RBP12.17□□□□□ -0.46
VPS16-202ENST00000380445 MUC22E2RYF6 1773 aaPredicted RBP12.17□□□□□ -0.46
VPS16-202ENST00000380445 ALPK3Q96L96 1907 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 GNG14A0A1W2PPG7 69 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.17□□□□□ -0.46
VPS16-202ENST00000380445 PLK4O00444 970 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 SCN2BO60939 215 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 THRBP10828 461 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 EIF2DP41214 584 aaKnown RBP12.17□□□□□ -0.46
VPS16-202ENST00000380445 IL12RB1P42701 662 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 EMP3P54852 163 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 WNT3P56703 355 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 TSTA3Q13630 321 aaPredicted RBP12.17□□□□□ -0.46
VPS16-202ENST00000380445 TTC23Q5W5X9 447 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 GALNT18Q6P9A2 607 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 TBPL2Q6SJ96 375 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 ADAMTSL4Q6UY14 1074 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 YAF2Q8IY57 180 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 LAS2Q8IYD9 372 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 GAB3Q8WWW8 586 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 CDCA3Q99618 268 aaPredicted RBP12.17□□□□□ -0.46
VPS16-202ENST00000380445 RBM4BQ9BQ04 359 aaKnown RBP12.17□□□□□ -0.46
VPS16-202ENST00000380445 RBM4Q9BWF3 364 aaKnown RBP12.17□□□□□ -0.46
VPS16-202ENST00000380445 PRSS16Q9NQE7 514 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 PCDHB11Q9Y5F2 797 aa12.17□□□□□ -0.46
VPS16-202ENST00000380445 LAMA2P24043 3122 aaKnown RBP12.16□□□□□ -0.46
VPS16-202ENST00000380445 PORP16435 677 aaPredicted RBP12.16□□□□□ -0.46
VPS16-202ENST00000380445 ACADLP28330 430 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 TIA1P31483 386 aaKnown RBP eCLIP12.16□□□□□ -0.46
VPS16-202ENST00000380445 RPL3P39023 403 aaKnown RBP12.16□□□□□ -0.46
VPS16-202ENST00000380445 RPS13P62277 151 aaKnown RBP12.16□□□□□ -0.46
VPS16-202ENST00000380445 TAP2Q03519 686 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 VAC14Q08AM6 782 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 ZNF547Q8IVP9 402 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 OR5K1Q8NHB7 308 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 SLC5A11Q8WWX8 675 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 FBXL20Q96IG2 436 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 PHF12Q96QT6 1004 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 CARS2Q9HA77 564 aaKnown RBP12.16□□□□□ -0.46
VPS16-202ENST00000380445 TBCCD1Q9NVR7 557 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 RPS6KA6Q9UK32 745 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 LRRK1Q38SD2 2015 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 TCF20Q9UGU0 1960 aaKnown RBP12.16□□□□□ -0.46
VPS16-202ENST00000380445 HTR3EA5X5Y0 456 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 TRIM64A6NGJ6 449 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 TRIM64CA6NLI5 447 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 SEC24DO94855 1032 aaPredicted RBP12.16□□□□□ -0.46
VPS16-202ENST00000380445 CPSF4O95639 269 aaKnown RBP12.16□□□□□ -0.46
VPS16-202ENST00000380445 RPN2P04844 631 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 KELP23276 732 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 OPRD1P41143 372 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 RAE1P78406 368 aaKnown RBP12.16□□□□□ -0.46
VPS16-202ENST00000380445 FCHO2Q0JRZ9 810 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 SLBPQ14493 270 aaKnown RBP eCLIP12.16□□□□□ -0.46
VPS16-202ENST00000380445 VMACQ2NL98 169 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 CPZQ66K79 652 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 ZCCHC8Q6NZY4 707 aaKnown RBP12.16□□□□□ -0.46
VPS16-202ENST00000380445 CRTC3Q6UUV7 619 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 NANOGNBQ7Z5D8 188 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 AMZ2Q86W34 360 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 ADAMTS16Q8TE57 1224 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 COX14Q96I36 57 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 ATAD3AQ9NVI7 634 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 USE1Q9NZ43 259 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 ASF1AQ9Y294 204 aa12.16□□□□□ -0.46
VPS16-202ENST00000380445 DNMT3AQ9Y6K1 912 aaPredicted RBP12.16□□□□□ -0.46
VPS16-202ENST00000380445 DENND4AQ7Z401 1863 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 GABRR3A8MPY1 467 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 PCDH7O60245 1069 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 KAT7O95251 611 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 ETHE1O95571 254 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms