RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 ASMTP46597 345 aa19.08■□□□□ 0.64
PDLIM5-205ENST00000380180 CYP51A1Q16850 503 aa19.08■□□□□ 0.64
PDLIM5-205ENST00000380180 HKDC1Q2TB90 917 aa19.08■□□□□ 0.64
PDLIM5-205ENST00000380180 ANKRD26P1Q6NSI1 321 aa19.08■□□□□ 0.64
PDLIM5-205ENST00000380180 MSANTD1Q6ZTZ1 278 aa19.08■□□□□ 0.64
PDLIM5-205ENST00000380180 COMMD6Q7Z4G1 85 aa19.08■□□□□ 0.64
PDLIM5-205ENST00000380180 VN1R5Q7Z5H4 357 aa19.08■□□□□ 0.64
PDLIM5-205ENST00000380180 PGBD3Q8N328 593 aa19.08■□□□□ 0.64
PDLIM5-205ENST00000380180 OR8J2Q8NGG1 315 aa19.08■□□□□ 0.64
PDLIM5-205ENST00000380180 MIEF2Q96C03 454 aa19.08■□□□□ 0.64
PDLIM5-205ENST00000380180 PDXPQ96GD0 296 aa19.08■□□□□ 0.64
PDLIM5-205ENST00000380180 AURKBQ96GD4 344 aaPredicted RBP19.08■□□□□ 0.64
PDLIM5-205ENST00000380180 GBP5Q96PP8 586 aa19.08■□□□□ 0.64
PDLIM5-205ENST00000380180 PELI2Q9HAT8 420 aa19.08■□□□□ 0.64
PDLIM5-205ENST00000380180 SIRT5Q9NXA8 310 aa19.08■□□□□ 0.64
PDLIM5-205ENST00000380180 BTBD3Q9Y2F9 522 aa19.08■□□□□ 0.64
PDLIM5-205ENST00000380180 MDC1Q14676 2089 aaKnown RBP19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 RFXANKO14593 260 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 SCN2BO60939 215 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 GBAP04062 536 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 LAMP1P11279 417 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 RAB28P51157 221 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 WNT3P56703 355 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 PHEXP78562 749 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 CTBSQ01459 385 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 TBCELQ5QJ74 424 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 RD3Q7Z3Z2 195 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 AMIGO2Q86SJ2 522 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 TICAM1Q8IUC6 712 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 PHACTR4Q8IZ21 702 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 ADGRG5Q8IZF4 528 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 TMEM132CQ8N3T6 1108 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 DTWD1Q8N5C7 304 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 ABHD11Q8NFV4 315 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 OR2T12Q8NG77 320 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 PPWD1Q96BP3 646 aaKnown RBP19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 WASH6PQ9NQA3 447 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 SLC2A4RGQ9NR83 387 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 SCHIP1Q9P0W5 487 aaPredicted RBP19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 MAGEL2Q9UJ55 1249 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 INVSQ9Y283 1065 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 LRP4O75096 1905 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 PRAMEF33A0A0G2JMD5 474 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 GABRR3A8MPY1 467 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 H7BY64 318 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 SCAMP2O15127 329 aaKnown RBP19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 IL10P22301 178 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 TDGQ13569 410 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 TCEA2Q15560 299 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 RPE65Q16518 533 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 HMBOX1Q6NT76 420 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 ICA1LQ8NDH6 482 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 CATSPER1Q8NEC5 780 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 WDR48Q8TAF3 677 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 TSACCQ96A04 125 aaPredicted RBP19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 BIRC7Q96CA5 298 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 WDR92Q96MX6 357 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 PRAP1Q96NZ9 151 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 AIF1LQ9BQI0 150 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 MVB12BQ9H7P6 319 aa19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 KAT8Q9H7Z6 458 aaKnown RBP19.07■□□□□ 0.64
PDLIM5-205ENST00000380180 APBB3O95704 486 aa19.06■□□□□ 0.64
PDLIM5-205ENST00000380180 SEMA4FO95754 770 aa19.06■□□□□ 0.64
PDLIM5-205ENST00000380180 GPIP06744 558 aa19.06■□□□□ 0.64
PDLIM5-205ENST00000380180 GGT1P19440 569 aa19.06■□□□□ 0.64
PDLIM5-205ENST00000380180 CXCR2P25025 360 aa19.06■□□□□ 0.64
PDLIM5-205ENST00000380180 PTX3P26022 381 aaPredicted RBP19.06■□□□□ 0.64
PDLIM5-205ENST00000380180 CCR8P51685 355 aa19.06■□□□□ 0.64
PDLIM5-205ENST00000380180 DUOXA1Q1HG43 343 aa19.06■□□□□ 0.64
PDLIM5-205ENST00000380180 GCNT7Q6ZNI0 430 aa19.06■□□□□ 0.64
PDLIM5-205ENST00000380180 OR52E1Q8NGJ3 308 aa19.06■□□□□ 0.64
PDLIM5-205ENST00000380180 STARD8Q92502 1023 aa19.06■□□□□ 0.64
PDLIM5-205ENST00000380180 NELL1Q92832 810 aa19.06■□□□□ 0.64
PDLIM5-205ENST00000380180 CPPED1Q9BRF8 314 aaPredicted RBP19.06■□□□□ 0.64
PDLIM5-205ENST00000380180 USP36Q9P275 1121 aaKnown RBP19.06■□□□□ 0.64
PDLIM5-205ENST00000380180 TBC1D29Q9UFV1 150 aa19.06■□□□□ 0.64
PDLIM5-205ENST00000380180 FEZF1A0PJY2 475 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 YY2O15391 372 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 HNRNPRO43390 633 aaKnown RBP19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 PIM1P11309 404 aaPredicted RBP19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 AK4P27144 223 aaPredicted RBP19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 HTR1BP28222 390 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 TRPC1P48995 793 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 CPTPQ5TA50 214 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 ANO7Q6IWH7 933 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 METTL4Q8N3J2 472 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 ANKRD53Q8N9V6 530 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 ZNF548Q8NEK5 533 aaPredicted RBP19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 OR4K1Q8NGD4 311 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 NSMCE2Q96MF7 247 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 PANX1Q96RD7 426 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 TBCDQ9BTW9 1192 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 DUSP26Q9BV47 211 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 RHBGQ9H310 441 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 POLMQ9NP87 494 aaPredicted RBP19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 FAM120CQ9NX05 1096 aaKnown RBP19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 PNMA8BQ9ULN7 279 aaPredicted RBP19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 MAPRE3Q9UPY8 281 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 ERVK-11Q9UQG0 969 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms