RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 C17orf50Q8WW18 174 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 PHF21AQ96BD5 680 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 TADA1Q96BN2 335 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 PYCR2Q96C36 320 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 CCDC138Q96M89 665 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 TEFMQ96QE5 360 aaKnown RBP6.34□□□□□ -1.39
NEDD9-202ENST00000379446 SERPINI1Q99574 410 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 KLF16Q9BXK1 252 aaPredicted RBP6.34□□□□□ -1.39
NEDD9-202ENST00000379446 MKRN2Q9H000 416 aaKnown RBP6.34□□□□□ -1.39
NEDD9-202ENST00000379446 LRRN3Q9H3W5 708 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 WDR55Q9H6Y2 383 aaPredicted RBP6.34□□□□□ -1.39
NEDD9-202ENST00000379446 DYNLRB1Q9NP97 96 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 DAPK2Q9UIK4 370 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 MRPS2Q9Y399 296 aaKnown RBP6.34□□□□□ -1.39
NEDD9-202ENST00000379446 DIDO1Q9BTC0 2240 aaKnown RBP6.34□□□□□ -1.4
NEDD9-202ENST00000379446 SEC16AO15027 2179 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 PRSS38A1L453 326 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 BCLAF3A2AJT9 711 aaKnown RBP6.33□□□□□ -1.4
NEDD9-202ENST00000379446 FAM234BA2RU67 622 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 TLX3O43711 291 aaPredicted RBP6.33□□□□□ -1.4
NEDD9-202ENST00000379446 CACNG3O60359 315 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 FKBP6O75344 327 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 RXRGP48443 463 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 PGGT1BP53609 377 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 SLC18A1P54219 525 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.33□□□□□ -1.44e-7■■□□□ 12
NEDD9-202ENST00000379446 DEFB134Q4QY38 66 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 TTC23Q5W5X9 447 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 OGFOD2Q6N063 350 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 SCIMPQ6UWF3 145 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 PARS2Q7L3T8 475 aaKnown RBP6.33□□□□□ -1.4
NEDD9-202ENST00000379446 GPR141Q7Z602 305 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 SNX32Q86XE0 403 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 PEX5LQ8IYB4 626 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 CENPSQ8N2Z9 138 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 PQLC3Q8N755 202 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 ENDOVQ8N8Q3 282 aaKnown RBP6.33□□□□□ -1.4
NEDD9-202ENST00000379446 FAM156AQ8NDB6 213 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 HPS1Q92902 700 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 GATA6Q92908 595 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 C3orf49Q96BT1 292 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 GPR21Q99679 349 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 SLC6A16Q9GZN6 736 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 TRIM39Q9HCM9 518 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 TIMMDC1Q9NPL8 285 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 GPR83Q9NYM4 423 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 DCDC2Q9UHG0 476 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 CNTN6Q9UQ52 1028 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 SLC9A8Q9Y2E8 581 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 SAC3D1A6NKF1 404 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 ZNF28P17035 718 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 GP5P40197 560 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 BDKRB1P46663 353 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 CHRNEQ04844 493 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 MLC1Q15049 377 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 TRIM71Q2Q1W2 868 aaKnown RBP6.33□□□□□ -1.4
NEDD9-202ENST00000379446 C14orf28Q4W4Y0 310 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 GPR107Q5VW38 600 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 NEK5Q6P3R8 708 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 TTC33Q6PID6 262 aaPredicted RBP6.33□□□□□ -1.4
NEDD9-202ENST00000379446 NET1Q7Z628 596 aaPredicted RBP6.33□□□□□ -1.4
NEDD9-202ENST00000379446 TMEM105Q8N8V8 129 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 FNDC5Q8NAU1 212 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 TSPAN14Q8NG11 270 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 OR10H5Q8NGA6 315 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 CCDC126Q96EE4 140 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 PTCD3Q96EY7 689 aaKnown RBP6.33□□□□□ -1.4
NEDD9-202ENST00000379446 PEX11GQ96HA9 241 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 SFXN2Q96NB2 322 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 OR1F2PQ96R84 312 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 ZNF556Q9HAH1 456 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 S100A14Q9HCY8 104 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 ITM2CQ9NQX7 267 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 EXD2Q9NVH0 621 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 ANKRD10Q9NXR5 420 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 TMEM216Q9P0N5 145 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 KLHL20Q9Y2M5 609 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 PSAT1Q9Y617 370 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 DNMT3AQ9Y6K1 912 aaPredicted RBP6.33□□□□□ -1.4
NEDD9-202ENST00000379446 LINC00854A0A1B0GVQ3 168 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 FAM90A27PA6NNH2 459 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 E7ESA3 106 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 NPIPA5E9PKD4 350 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 TNFAIP8O95379 198 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 TGDSO95455 350 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 ZBTB11O95625 1053 aaPredicted RBP6.33□□□□□ -1.4
NEDD9-202ENST00000379446 IL1RNP18510 177 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 EPHA3P29320 983 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 VASPP50552 380 aaPredicted RBP6.33□□□□□ -1.4
NEDD9-202ENST00000379446 SLC18A2Q05940 514 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 FCHO2Q0JRZ9 810 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 KIAA1614Q5VZ46 1190 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 FSTL4Q6MZW2 842 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 FAM45BPQ6NSW5 357 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 ASB18Q6ZVZ8 466 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 KRT73Q86Y46 540 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 GPR65Q8IYL9 337 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 OR13C4Q8NGS5 318 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 FAM45AQ8TCE6 357 aa6.33□□□□□ -1.4
NEDD9-202ENST00000379446 THOC3Q96J01 351 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms