RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 AURKAO14965 403 aa20.52■□□□□ 0.87
SKI-201ENST00000378536 KLK3P07288 261 aaPredicted RBP20.52■□□□□ 0.87
SKI-201ENST00000378536 SHHQ15465 462 aa20.52■□□□□ 0.87
SKI-201ENST00000378536 PPP1R3AQ16821 1122 aa20.52■□□□□ 0.87
SKI-201ENST00000378536 JPH3Q8WXH2 748 aaPredicted RBP20.52■□□□□ 0.87
SKI-201ENST00000378536 MRPL38Q96DV4 380 aaKnown RBP20.52■□□□□ 0.87
SKI-201ENST00000378536 IL21RQ9HBE5 538 aa20.52■□□□□ 0.87
SKI-201ENST00000378536 LHX3Q9UBR4 397 aa20.52■□□□□ 0.87
SKI-201ENST00000378536 LINC00854A0A1B0GVQ3 168 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 MED26O95402 600 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 THEGLP0DJG4 465 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 HSD3B1P14060 373 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 HSD3B2P26439 372 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 RGRP47804 291 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 OR56A1Q8NGH5 318 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 FAM110BQ8TC76 370 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 COL21A1Q96P44 957 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 MEAF6Q9HAF1 191 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 RASSF1Q9NS23 344 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 RFXAPO00287 272 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 B4GALT2O60909 372 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 NR2F6P10588 404 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 RPP38P78345 283 aaKnown RBP20.51■□□□□ 0.87
SKI-201ENST00000378536 NOXRED1Q6NXP6 359 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 ISCA2Q86U28 154 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 CACTIN-AS1Q8N1I8 211 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 C19orf18Q8NEA5 215 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 ATP6V1C2Q8NEY4 427 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 FUBP1Q96AE4 644 aaKnown RBP20.51■□□□□ 0.87
SKI-201ENST00000378536 MPP4Q96JB8 637 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 IGSF5Q9NSI5 407 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 CFL2Q9Y281 166 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 NPPAP01160 153 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 TIMP2P16035 220 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 HOXA9P31269 272 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 RPL5P46777 297 aaKnown RBP20.51■□□□□ 0.87
SKI-201ENST00000378536 ACTR3P61158 418 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 ZNF789Q5FWF6 425 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 ANKRD54Q6NXT1 300 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 ASPGQ86U10 573 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 TREX1Q9NSU2 369 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 ZSCAN32Q9NX65 697 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 XKRYO14609 159 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 AXIN1O15169 862 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 TPST2O60704 377 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 SLC7A1P30825 629 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 RPA4Q13156 261 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 ART5Q96L15 291 aa20.51■□□□□ 0.87
SKI-201ENST00000378536 NOL6Q9H6R4 1146 aaKnown RBP20.51■□□□□ 0.87
SKI-201ENST00000378536 SDHDO14521 159 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 JSRP1Q96MG2 331 aaPredicted RBP20.5■□□□□ 0.87
SKI-201ENST00000378536 REEP4Q9H6H4 257 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 PTGFRNQ9P2B2 879 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 E7ENX8 843 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 GMPRP36959 345 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 TMEM214Q6NUQ4 689 aaKnown RBP20.5■□□□□ 0.87
SKI-201ENST00000378536 TAPBPLQ9BX59 468 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 KCNH6Q9H252 994 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 TPT1P8Q9HAU6 139 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 C8orf89P0DMQ9 161 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 SOX9P48436 509 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 ADGRE1Q14246 886 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 C6orf52Q5T4I8 152 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 TANGO2Q6ICL3 276 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 GTPBP3Q969Y2 492 aaKnown RBP20.5■□□□□ 0.87
SKI-201ENST00000378536 FAM221BA6H8Z2 402 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 C6orf47O95873 294 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 PEX2P28328 305 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 DIO3P55073 304 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 VSX2P58304 361 aaPredicted RBP20.5■□□□□ 0.87
SKI-201ENST00000378536 MANEALQ5VSG8 457 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 NEK10Q6ZWH5 1172 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 SLC29A4Q7RTT9 530 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 OR7A2PQ8NGA2 310 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 LINC01599Q8WXQ3 324 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 SLC12A9Q9BXP2 914 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 COL4A5P29400 1685 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 ANKRD31Q8N7Z5 1873 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 REM1O75628 298 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 BCHEP06276 602 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 ASGR2P07307 311 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 HNRNPKP61978 463 aaKnown RBP eCLIP20.5■□□□□ 0.879e-7■■□□□ 12.9
SKI-201ENST00000378536 DOC2AQ14183 400 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 MLIPQ5VWP3 458 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 ZFAND4Q86XD8 727 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 HLA-CQ95604 372 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 CRISPLD1Q9H336 500 aa20.5■□□□□ 0.87
SKI-201ENST00000378536 NXPE4Q6UWF7 544 aa20.49■□□□□ 0.87
SKI-201ENST00000378536 LIPIQ6XZB0 460 aa20.49■□□□□ 0.87
SKI-201ENST00000378536 CCDC103Q8IW40 242 aa20.49■□□□□ 0.87
SKI-201ENST00000378536 CD200R1Q8TD46 325 aa20.49■□□□□ 0.87
SKI-201ENST00000378536 XRCC1P18887 633 aaPredicted RBP20.49■□□□□ 0.87
SKI-201ENST00000378536 CCT3P49368 545 aaKnown RBP20.49■□□□□ 0.87
SKI-201ENST00000378536 GSK3BP49841 420 aa20.49■□□□□ 0.87
SKI-201ENST00000378536 CEACAM20Q6UY09 585 aa20.49■□□□□ 0.87
SKI-201ENST00000378536 ZNF527Q8NB42 609 aa20.49■□□□□ 0.87
SKI-201ENST00000378536 KHSRPQ92945 711 aaKnown RBP eCLIP20.49■□□□□ 0.871e-8■■■□□ 15.8
SKI-201ENST00000378536 L3HYPDHQ96EM0 354 aa20.49■□□□□ 0.87
SKI-201ENST00000378536 CAMK1GQ96NX5 476 aa20.49■□□□□ 0.87
SKI-201ENST00000378536 PDE10AQ9Y233 779 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms