RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 HSF1Q00613 529 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 ARHGAP1Q07960 439 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 GLB1LQ6UWU2 654 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 RELL1Q8IUW5 271 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 RDH10Q8IZV5 341 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 RBFAQ8N0V3 343 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 CADM2Q8N3J6 435 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 YIPF7Q8N8F6 280 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 OR7G3Q8NG95 312 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 OR10G2Q8NGC3 310 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 PITHD1Q9GZP4 211 aaPredicted RBP8.52□□□□□ -1.05
LIG3-202ENST00000378526 PNPOQ9NVS9 261 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 PARPBPQ9NWS1 579 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 ZNRF3Q9ULT6 936 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 DNMT1P26358 1616 aaKnown RBP8.52□□□□□ -1.05
LIG3-202ENST00000378526 SHROOM2Q13796 1616 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 E7EQ34 232 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 GOSR2O14653 212 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 MRPS14O60783 128 aaKnown RBP8.52□□□□□ -1.05
LIG3-202ENST00000378526 F10P00742 488 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 CHRNA1P02708 482 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 CLEC3BP05452 202 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 POLR2CP19387 275 aaPredicted RBP8.52□□□□□ -1.05
LIG3-202ENST00000378526 ALDH7A1P49419 539 aaKnown RBP8.52□□□□□ -1.05
LIG3-202ENST00000378526 BCL2L1Q07817 233 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 TRAM2Q15035 370 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 BAK1Q16611 211 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 BCL2L15Q5TBC7 163 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 NT5DC1Q5TFE4 455 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 AGAP7PQ5VUJ5 663 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 OR10K2Q6IF99 312 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 RELL2Q8NC24 303 aaPredicted RBP8.52□□□□□ -1.05
LIG3-202ENST00000378526 GPR156Q8NFN8 814 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 OR8S1Q8NH09 359 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 DCUN1D4Q92564 292 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 BEX2Q9BXY8 128 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 BRINP2Q9C0B6 783 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 ZDHHC6Q9H6R6 413 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 MINDY3Q9H8M7 445 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 NTN4Q9HB63 628 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 FAM212BQ9NTI7 297 aaPredicted RBP8.52□□□□□ -1.05
LIG3-202ENST00000378526 THG1LQ9NWX6 298 aaKnown RBP8.52□□□□□ -1.05
LIG3-202ENST00000378526 TVP23BQ9NYZ1 205 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 ABCC10Q5T3U5 1492 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 NCANO14594 1321 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 TRAV20A0A0B4J274 112 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 FAM234BA2RU67 622 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 KRBA1A5PL33 1030 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 NSA2O95478 260 aaKnown RBP8.51□□□□□ -1.05
LIG3-202ENST00000378526 HTR1AP08908 422 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 GTF2H2Q13888 395 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 PGM5Q15124 567 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 GLT8D1Q68CQ7 371 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 GTF2H2CQ6P1K8 395 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 LSMEM2Q8N112 164 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 FLAD1Q8NFF5 587 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 LENG8Q96PV6 779 aaPredicted RBP8.51□□□□□ -1.05
LIG3-202ENST00000378526 GREM2Q9H772 168 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 QTRT2Q9H974 415 aaKnown RBP8.51□□□□□ -1.05
LIG3-202ENST00000378526 CTPS2Q9NRF8 586 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 PCDHGA2Q9Y5H1 932 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 ABCA10Q8WWZ4 1543 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 FAM205AQ6ZU69 1335 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 C22orf31O95567 290 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 PPP3CBP16298 524 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 AQP1P29972 269 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 EEFSECP57772 596 aaKnown RBP8.51□□□□□ -1.05
LIG3-202ENST00000378526 NFKB2Q00653 900 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 CAPSQ13938 189 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 PHYHD1Q5SRE7 291 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 FAM122BQ7Z309 247 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 LILRB2Q8N423 598 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 OR10A6Q8NH74 314 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 SLC7A13Q8TCU3 470 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 FRS2Q8WU20 508 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 SMAP2Q8WU79 429 aaPredicted RBP8.51□□□□□ -1.05
LIG3-202ENST00000378526 C22orf15Q8WYQ4 148 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 MAL2Q969L2 176 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 TNFRSF10BO14763 440 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 DIRAS3O95661 229 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 GNRH1P01148 92 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 TYRP14679 529 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 KDELR1P24390 212 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 ZDHHC20Q5W0Z9 365 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 CFAP77Q6ZQR2 320 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 TSPAN10Q9H1Z9 355 aaPredicted RBP8.51□□□□□ -1.05
LIG3-202ENST00000378526 NT5DC2Q9H857 520 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.51□□□□□ -1.05
LIG3-202ENST00000378526 HPRP00739 348 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 LRG1P02750 347 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 RAB6AP20340 208 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 IDH3AP50213 366 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 TGFB2P61812 414 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 SNRPD2P62316 118 aaKnown RBP8.51□□□□□ -1.05
LIG3-202ENST00000378526 SELPLGQ14242 412 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 DUSP6Q16828 381 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 C9orf64Q5T6V5 341 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 MLIPQ5VWP3 458 aa8.51□□□□□ -1.05
LIG3-202ENST00000378526 ZC3H14Q6PJT7 736 aaKnown RBP8.51□□□□□ -1.05
LIG3-202ENST00000378526 MOXD1Q6UVY6 613 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms