RNA–Protein interactions for RNA: ENST00000377823.1

CUBN-201, Transcript of cubilin, humanhuman

TSL 3 BASIC

Gene CUBN, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-201ENST00000377823 GRK7Q8WTQ7 553 aa3.55□□□□□ -1.84
CUBN-201ENST00000377823 TMEM190Q8WZ59 177 aa3.55□□□□□ -1.84
CUBN-201ENST00000377823 CCDC47Q96A33 483 aaKnown RBP3.55□□□□□ -1.84
CUBN-201ENST00000377823 CENPTQ96BT3 561 aa3.55□□□□□ -1.84
CUBN-201ENST00000377823 C10orf90Q96M02 699 aa3.55□□□□□ -1.84
CUBN-201ENST00000377823 BTBD9Q96Q07 612 aa3.55□□□□□ -1.84
CUBN-201ENST00000377823 CDCA3Q99618 268 aaPredicted RBP3.55□□□□□ -1.84
CUBN-201ENST00000377823 HNRNPABQ99729 332 aaKnown RBP3.55□□□□□ -1.84
CUBN-201ENST00000377823 PIGQQ9BRB3 760 aa3.55□□□□□ -1.84
CUBN-201ENST00000377823 FUT8Q9BYC5 575 aa3.55□□□□□ -1.84
CUBN-201ENST00000377823 MMADHCQ9H3L0 296 aaPredicted RBP3.55□□□□□ -1.84
CUBN-201ENST00000377823 SUDS3Q9H7L9 328 aaPredicted RBP3.55□□□□□ -1.84
CUBN-201ENST00000377823 RAVER2Q9HCJ3 691 aaKnown RBP3.55□□□□□ -1.84
CUBN-201ENST00000377823 ABCB8Q9NUT2 735 aa3.55□□□□□ -1.84
CUBN-201ENST00000377823 EPHA6Q9UF33 1036 aa3.55□□□□□ -1.84
CUBN-201ENST00000377823 LEF1Q9UJU2 399 aaPredicted RBP3.55□□□□□ -1.84
CUBN-201ENST00000377823 GMEB2Q9UKD1 530 aa3.55□□□□□ -1.84
CUBN-201ENST00000377823 ISY1Q9ULR0 285 aaKnown RBP3.55□□□□□ -1.84
CUBN-201ENST00000377823 LIPT1Q9Y234 373 aa3.55□□□□□ -1.84
CUBN-201ENST00000377823 PPP2R2CQ9Y2T4 447 aa3.55□□□□□ -1.84
CUBN-201ENST00000377823 KLK4Q9Y5K2 254 aa3.55□□□□□ -1.84
CUBN-201ENST00000377823 TRAV18A0A075B6X5 111 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 KBTBD13C9JR72 458 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 SLC33A1O00400 549 aaPredicted RBP3.54□□□□□ -1.84
CUBN-201ENST00000377823 PAK4O96013 591 aaPredicted RBP3.54□□□□□ -1.84
CUBN-201ENST00000377823 RAF1P04049 648 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 SP9P0CG40 484 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 CEACAM1P13688 526 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 ITIH1P19827 911 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 DUTP33316 252 aaKnown RBP3.54□□□□□ -1.84
CUBN-201ENST00000377823 GLIPR1P48060 266 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 GNB1P62873 340 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 TMED1Q13445 227 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 KRTAP24-1Q3LI83 254 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 IQCCQ4KMZ1 466 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.54□□□□□ -1.84
CUBN-201ENST00000377823 ARHGAP17Q68EM7 881 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 PSRC1Q6PGN9 363 aaPredicted RBP3.54□□□□□ -1.84
CUBN-201ENST00000377823 IYDQ6PHW0 289 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 MEX3DQ86XN8 651 aaKnown RBP3.54□□□□□ -1.84
CUBN-201ENST00000377823 LACC1Q8IV20 430 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 CCDC60Q8IWA6 550 aaPredicted RBP3.54□□□□□ -1.84
CUBN-201ENST00000377823 LSMEM2Q8N112 164 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 CHCHD4Q8N4Q1 142 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 FAM76AQ8TAV0 307 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 UBLCP1Q8WVY7 318 aaPredicted RBP3.54□□□□□ -1.84
CUBN-201ENST00000377823 APOBEC4Q8WW27 367 aaKnown RBP3.54□□□□□ -1.84
CUBN-201ENST00000377823 TEKT1Q969V4 418 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 LPAR4Q99677 370 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 SRD5A3Q9H8P0 318 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 C2orf42Q9NWW7 574 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 SLCO1C1Q9NYB5 712 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 MYH14Q7Z406 1995 aaKnown RBP3.54□□□□□ -1.84
CUBN-201ENST00000377823 HECW2Q9P2P5 1572 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 ARAP1Q96P48 1450 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 ARID2Q68CP9 1835 aa3.54□□□□□ -1.84
CUBN-201ENST00000377823 TCF20Q9UGU0 1960 aaKnown RBP3.53□□□□□ -1.84
CUBN-201ENST00000377823 A0A087WW49 117 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 ILVBLA1L0T0 632 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 PRR23AA6NEV1 266 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 SDR42E2A6NKP2 422 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 NPIPA3F8WFD2 350 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 ZNF263O14978 683 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 FMO6PO60774 539 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 IGKV3-20P01619 116 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 DLATP10515 647 aaKnown RBP3.53□□□□□ -1.84
CUBN-201ENST00000377823 SLC2A2P11168 524 aaPredicted RBP3.53□□□□□ -1.84
CUBN-201ENST00000377823 EEF2P13639 858 aaKnown RBP3.53□□□□□ -1.84
CUBN-201ENST00000377823 CD59P13987 128 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 PIK3R1P27986 724 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 ST8SIA6P61647 398 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 ASIC1P78348 528 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 HMGN5P82970 282 aaKnown RBP3.53□□□□□ -1.84
CUBN-201ENST00000377823 TRIM29Q14134 588 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 RCN2Q14257 317 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 ZNF74Q16587 644 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 ZNF674Q2M3X9 581 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 GLRA4Q5JXX5 417 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 PODNL1Q6PEZ8 512 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 SLC25A47Q6Q0C1 308 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 NHLRC1Q6VVB1 395 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 SLC24A5Q71RS6 500 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 BTN2A1Q7KYR7 527 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 OTUD6AQ7L8S5 288 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 CPEB2Q7Z5Q1 589 aaKnown RBP3.53□□□□□ -1.84
CUBN-201ENST00000377823 GPR141Q7Z602 305 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 PRUNE1Q86TP1 453 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 ANKRD46Q86W74 232 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 PRSS35Q8N3Z0 413 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 RAB42Q8N4Z0 105 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 FAM89BQ8N5H3 189 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 GBP7Q8N8V2 638 aaPredicted RBP3.53□□□□□ -1.84
CUBN-201ENST00000377823 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.53□□□□□ -1.84
CUBN-201ENST00000377823 OR5AP2Q8NGF4 316 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 OR4C15Q8NGM1 316 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 ARHGAP45Q92619 1136 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 LGALS12Q96DT0 336 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 RBM41Q96IZ5 413 aaKnown RBP3.53□□□□□ -1.84
CUBN-201ENST00000377823 NECTIN4Q96NY8 510 aa3.53□□□□□ -1.84
CUBN-201ENST00000377823 TSSK2Q96PF2 358 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms