RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 VN1R4Q7Z5H5 301 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 KRT78Q8N1N4 520 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 D2HGDHQ8N465 521 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 RNF175Q8N4F7 328 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 ZFYVE21Q9BQ24 234 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 PITHD1Q9GZP4 211 aaPredicted RBP20.38■□□□□ 0.85
CBWD3-202ENST00000377342 PTGDR2Q9Y5Y4 395 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 A0A0J9YVX5 310 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 MANBAO00462 879 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 OR1F1O43749 312 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 TBX6O95947 436 aaPredicted RBP20.38■□□□□ 0.85
CBWD3-202ENST00000377342 HMOX2P30519 316 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 CCKBRP32239 447 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 RPL14P50914 215 aaKnown RBP20.38■□□□□ 0.85
CBWD3-202ENST00000377342 RPS15AP62244 130 aaKnown RBP20.38■□□□□ 0.85
CBWD3-202ENST00000377342 FRG2Q64ET8 278 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 LRRC34Q8IZ02 419 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 CLYBLQ8N0X4 340 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 MFSD9Q8NBP5 474 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 USP7Q93009 1102 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 FRG2BQ96QU4 278 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 HBEGFQ99075 208 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 TUBB1Q9H4B7 451 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 FGFR1OP2Q9NVK5 253 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 SIDT1Q9NXL6 827 aaKnown RBP20.38■□□□□ 0.85
CBWD3-202ENST00000377342 TSC22D4Q9Y3Q8 395 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 PCDHGA11Q9Y5H2 935 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 DCHS1Q96JQ0 3298 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 CRCPO75575 148 aa20.37■□□□□ 0.85
CBWD3-202ENST00000377342 CTSBP07858 339 aa20.37■□□□□ 0.85
CBWD3-202ENST00000377342 GRK3P35626 688 aa20.37■□□□□ 0.85
CBWD3-202ENST00000377342 NEK2P51955 445 aa20.37■□□□□ 0.85
CBWD3-202ENST00000377342 CYP4F2P78329 520 aa20.37■□□□□ 0.85
CBWD3-202ENST00000377342 TRA2AQ13595 282 aaKnown RBP eCLIP20.37■□□□□ 0.85
CBWD3-202ENST00000377342 RBBP5Q15291 538 aaKnown RBP20.37■□□□□ 0.85
CBWD3-202ENST00000377342 MAVSQ7Z434 540 aa20.37■□□□□ 0.85
CBWD3-202ENST00000377342 MTERF4Q7Z6M4 381 aaKnown RBP20.37■□□□□ 0.85
CBWD3-202ENST00000377342 HUS1BQ8NHY5 278 aa20.37■□□□□ 0.85
CBWD3-202ENST00000377342 TWIST2Q8WVJ9 160 aa20.37■□□□□ 0.85
CBWD3-202ENST00000377342 RHBGQ9H310 441 aa20.37■□□□□ 0.85
CBWD3-202ENST00000377342 PDE7BQ9NP56 450 aa20.37■□□□□ 0.85
CBWD3-202ENST00000377342 LOC105369274A0A096LPK9 316 aa20.36■□□□□ 0.85
CBWD3-202ENST00000377342 LOC102723532A0A0G2JNH3 316 aa20.36■□□□□ 0.85
CBWD3-202ENST00000377342 HGSO14964 777 aaPredicted RBP20.36■□□□□ 0.85
CBWD3-202ENST00000377342 P2RX6O15547 441 aa20.36■□□□□ 0.85
CBWD3-202ENST00000377342 SKAP2O75563 359 aaPredicted RBP20.36■□□□□ 0.85
CBWD3-202ENST00000377342 KCNK5O95279 499 aa20.36■□□□□ 0.85
CBWD3-202ENST00000377342 PDYNP01213 254 aa20.36■□□□□ 0.85
CBWD3-202ENST00000377342 STATHP02808 62 aa20.36■□□□□ 0.85
CBWD3-202ENST00000377342 PCNAP12004 261 aa20.36■□□□□ 0.85
CBWD3-202ENST00000377342 INHBCP55103 352 aa20.36■□□□□ 0.85
CBWD3-202ENST00000377342 ABRAXAS2Q15018 415 aa20.36■□□□□ 0.85
CBWD3-202ENST00000377342 HIST2H2ACQ16777 129 aaPredicted RBP20.36■□□□□ 0.85
CBWD3-202ENST00000377342 HES3Q5TGS1 186 aa20.36■□□□□ 0.85
CBWD3-202ENST00000377342 HIST2H2AA3Q6FI13 130 aa20.36■□□□□ 0.85
CBWD3-202ENST00000377342 CGB2Q6NT52 195 aa20.36■□□□□ 0.85
CBWD3-202ENST00000377342 CRLF3Q8IUI8 442 aa20.36■□□□□ 0.85
CBWD3-202ENST00000377342 OR4N4Q8N0Y3 316 aa20.36■□□□□ 0.85
CBWD3-202ENST00000377342 PIWIL2Q8TC59 973 aaKnown RBP20.36■□□□□ 0.85
CBWD3-202ENST00000377342 ZNF473Q8WTR7 871 aaKnown RBP20.36■□□□□ 0.85
CBWD3-202ENST00000377342 UBE2E3Q969T4 207 aa20.36■□□□□ 0.85
CBWD3-202ENST00000377342 ELOVL6Q9H5J4 265 aa20.36■□□□□ 0.85
CBWD3-202ENST00000377342 DMRT3Q9NQL9 472 aa20.36■□□□□ 0.85
CBWD3-202ENST00000377342 ZFP69BQ9UJL9 534 aa20.36■□□□□ 0.85
CBWD3-202ENST00000377342 ADAM21Q9UKJ8 722 aa20.36■□□□□ 0.85
CBWD3-202ENST00000377342 SNX6Q9UNH7 406 aa20.36■□□□□ 0.85
CBWD3-202ENST00000377342 AP1M2Q9Y6Q5 423 aa20.36■□□□□ 0.85
CBWD3-202ENST00000377342 HYAL3O43820 417 aaPredicted RBP20.35■□□□□ 0.85
CBWD3-202ENST00000377342 VIMP08670 466 aaKnown RBP20.35■□□□□ 0.85
CBWD3-202ENST00000377342 KITP10721 976 aa20.35■□□□□ 0.85
CBWD3-202ENST00000377342 CDK4P11802 303 aa20.35■□□□□ 0.85
CBWD3-202ENST00000377342 FOLR1P15328 257 aa20.35■□□□□ 0.85
CBWD3-202ENST00000377342 AHRP35869 848 aa20.35■□□□□ 0.85
CBWD3-202ENST00000377342 SEC24CP53992 1094 aa20.35■□□□□ 0.85
CBWD3-202ENST00000377342 DDX39BQ13838 428 aaKnown RBP20.35■□□□□ 0.85
CBWD3-202ENST00000377342 ISXQ2M1V0 245 aa20.35■□□□□ 0.85
CBWD3-202ENST00000377342 SCIMPQ6UWF3 145 aa20.35■□□□□ 0.85
CBWD3-202ENST00000377342 CREB3L4Q8TEY5 395 aa20.35■□□□□ 0.85
CBWD3-202ENST00000377342 REPS1Q96D71 796 aa20.35■□□□□ 0.85
CBWD3-202ENST00000377342 ZNF285Q96NJ3 590 aa20.35■□□□□ 0.85
CBWD3-202ENST00000377342 TMEM74Q96NL1 305 aa20.35■□□□□ 0.85
CBWD3-202ENST00000377342 MTERF1Q99551 399 aaKnown RBP20.35■□□□□ 0.85
CBWD3-202ENST00000377342 APOBEC2Q9Y235 224 aaKnown RBP20.35■□□□□ 0.85
CBWD3-202ENST00000377342 MAGEB17A8MXT2 336 aa20.35■□□□□ 0.85
CBWD3-202ENST00000377342 H0YGG7 62 aa20.35■□□□□ 0.85
CBWD3-202ENST00000377342 AGRPO00253 132 aa20.35■□□□□ 0.85
CBWD3-202ENST00000377342 ZNF195O14628 629 aa20.35■□□□□ 0.85
CBWD3-202ENST00000377342 PIP5K1BO14986 540 aa20.35■□□□□ 0.85
CBWD3-202ENST00000377342 SHOX2O60902 331 aaPredicted RBP20.35■□□□□ 0.85
CBWD3-202ENST00000377342 KRT6AP02538 564 aa20.35■□□□□ 0.85
CBWD3-202ENST00000377342 KRT6BP04259 564 aa20.35■□□□□ 0.85
CBWD3-202ENST00000377342 MSL3P1P0C860 447 aa20.35■□□□□ 0.85
CBWD3-202ENST00000377342 KRT6CP48668 564 aa20.35■□□□□ 0.85
CBWD3-202ENST00000377342 ARF3P61204 181 aaPredicted RBP20.35■□□□□ 0.85
CBWD3-202ENST00000377342 IFT88Q13099 833 aa20.35■□□□□ 0.85
CBWD3-202ENST00000377342 GPR19Q15760 415 aa20.35■□□□□ 0.85
CBWD3-202ENST00000377342 PDCD2Q16342 344 aaPredicted RBP20.35■□□□□ 0.85
CBWD3-202ENST00000377342 SGO1Q5FBB7 561 aa20.35■□□□□ 0.85
CBWD3-202ENST00000377342 RNF165Q6ZSG1 346 aa20.35■□□□□ 0.85
CBWD3-202ENST00000377342 MCATQ8IVS2 390 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms