RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 DEFB103AP81534 67 aa24.43■■□□□ 1.5
C9orf40-201ENST00000376854 CREMQ03060 361 aa24.43■■□□□ 1.5
C9orf40-201ENST00000376854 CAMK2GQ13555 558 aaPredicted RBP24.43■■□□□ 1.5
C9orf40-201ENST00000376854 TMEM236Q5W0B7 351 aa24.43■■□□□ 1.5
C9orf40-201ENST00000376854 CHST14Q8NCH0 376 aa24.43■■□□□ 1.5
C9orf40-201ENST00000376854 DYNC2LI1Q8TCX1 351 aa24.43■■□□□ 1.5
C9orf40-201ENST00000376854 STARD8Q92502 1023 aa24.43■■□□□ 1.5
C9orf40-201ENST00000376854 TAMM41Q96BW9 452 aa24.43■■□□□ 1.5
C9orf40-201ENST00000376854 ALOXE3Q9BYJ1 711 aa24.43■■□□□ 1.5
C9orf40-201ENST00000376854 SMG9Q9H0W8 520 aaKnown RBP24.43■■□□□ 1.5
C9orf40-201ENST00000376854 PMF1-BGLAPU3KQ54 211 aa24.43■■□□□ 1.5
C9orf40-201ENST00000376854 PCDHGA12O60330 932 aa24.43■■□□□ 1.5
C9orf40-201ENST00000376854 WBP4O75554 376 aaKnown RBP24.43■■□□□ 1.5
C9orf40-201ENST00000376854 IQCCQ4KMZ1 466 aa24.43■■□□□ 1.5
C9orf40-201ENST00000376854 PAGE2BQ5JRK9 111 aa24.43■■□□□ 1.5
C9orf40-201ENST00000376854 REM2Q8IYK8 340 aaPredicted RBP24.43■■□□□ 1.5
C9orf40-201ENST00000376854 MED8Q96G25 268 aa24.43■■□□□ 1.5
C9orf40-201ENST00000376854 C7orf34Q96L11 122 aa24.43■■□□□ 1.5
C9orf40-201ENST00000376854 PRM3Q9NNZ6 103 aa24.43■■□□□ 1.5
C9orf40-201ENST00000376854 FBXO8Q9NRD0 319 aa24.43■■□□□ 1.5
C9orf40-201ENST00000376854 SLCO3A1Q9UIG8 710 aa24.43■■□□□ 1.5
C9orf40-201ENST00000376854 SLC25A13Q9UJS0 675 aa24.43■■□□□ 1.5
C9orf40-201ENST00000376854 VPS4AQ9UN37 437 aa24.43■■□□□ 1.5
C9orf40-201ENST00000376854 TRIM17Q9Y577 477 aa24.43■■□□□ 1.5
C9orf40-201ENST00000376854 ARHGEF33A8MVX0 844 aa24.42■■□□□ 1.5
C9orf40-201ENST00000376854 SH3BGRLO75368 114 aa24.42■■□□□ 1.5
C9orf40-201ENST00000376854 CRYBA2P53672 197 aa24.42■■□□□ 1.5
C9orf40-201ENST00000376854 KCNJ10P78508 379 aa24.42■■□□□ 1.5
C9orf40-201ENST00000376854 EEF1AKMT2Q5JPI9 291 aaKnown RBP24.42■■□□□ 1.5
C9orf40-201ENST00000376854 CPTPQ5TA50 214 aa24.42■■□□□ 1.5
C9orf40-201ENST00000376854 AHSA2Q719I0 299 aa24.42■■□□□ 1.5
C9orf40-201ENST00000376854 IPCEF1Q8WWN9 437 aaPredicted RBP24.42■■□□□ 1.5
C9orf40-201ENST00000376854 CLP1Q92989 425 aaKnown RBP24.42■■□□□ 1.5
C9orf40-201ENST00000376854 EPYCQ99645 322 aa24.42■■□□□ 1.5
C9orf40-201ENST00000376854 SPATA9Q9BWV2 254 aa24.42■■□□□ 1.5
C9orf40-201ENST00000376854 OR2AG2A6NM03 316 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 GABRR3A8MPY1 467 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 SGTAO43765 313 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 FKTNO75072 461 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 ATP6V1G1O75348 118 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 GSTM1P09488 218 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 AQP1P29972 269 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 CA8P35219 290 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 INAQ16352 499 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 Q6ZVU0 165 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 SNX29P2Q8IUI4 249 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 RASGRP3Q8IV61 690 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 MFSD4AQ8N468 514 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 MAL2Q969L2 176 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 C11orf24Q96F05 449 aaPredicted RBP24.41■■□□□ 1.5
C9orf40-201ENST00000376854 CHST8Q9H2A9 424 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 FAM83DQ9H4H8 585 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 SGK2Q9HBY8 427 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 ADPRHL2Q9NX46 363 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 TMEM247A6NEH6 219 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 TMEM202A6NGA9 273 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 LEFTY2O00292 366 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 SUV39H1O43463 412 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 DPM1O60762 260 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 SLCO2B1O94956 709 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 ETHE1O95571 254 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 GRK3P35626 688 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 SFSWAPQ12872 951 aaKnown RBP24.41■■□□□ 1.5
C9orf40-201ENST00000376854 NAE1Q13564 534 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 ZNF648Q5T619 568 aaPredicted RBP24.41■■□□□ 1.5
C9orf40-201ENST00000376854 ENTHD1Q8IYW4 607 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 C1orf52Q8N6N3 182 aaKnown RBP24.41■■□□□ 1.5
C9orf40-201ENST00000376854 VPS37AQ8NEZ2 397 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 OR6Q1Q8NGQ2 317 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 APH1BQ8WW43 257 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 ZNF689Q96CS4 500 aaPredicted RBP24.41■■□□□ 1.5
C9orf40-201ENST00000376854 RUBCNLQ9H714 662 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 BTNL2Q9UIR0 455 aa24.41■■□□□ 1.5
C9orf40-201ENST00000376854 NUP214P35658 2090 aaPredicted RBP24.41■■□□□ 1.5
C9orf40-201ENST00000376854 CXorf51AA0A1B0GTR3 108 aa24.4■■□□□ 1.5
C9orf40-201ENST00000376854 C1orf226A1L170 272 aa24.4■■□□□ 1.5
C9orf40-201ENST00000376854 KRBA1A5PL33 1030 aa24.4■■□□□ 1.5
C9orf40-201ENST00000376854 GRM6O15303 877 aa24.4■■□□□ 1.5
C9orf40-201ENST00000376854 LCKP06239 509 aa24.4■■□□□ 1.5
C9orf40-201ENST00000376854 BMP4P12644 408 aa24.4■■□□□ 1.5
C9orf40-201ENST00000376854 POLR2LP62875 67 aaKnown RBP24.4■■□□□ 1.5
C9orf40-201ENST00000376854 RAE1P78406 368 aaKnown RBP24.4■■□□□ 1.5
C9orf40-201ENST00000376854 HKDC1Q2TB90 917 aa24.4■■□□□ 1.5
C9orf40-201ENST00000376854 GRHL2Q6ISB3 625 aa24.4■■□□□ 1.5
C9orf40-201ENST00000376854 GDPD4Q6W3E5 623 aa24.4■■□□□ 1.5
C9orf40-201ENST00000376854 ANKRD33Q7Z3H0 272 aa24.4■■□□□ 1.5
C9orf40-201ENST00000376854 PHF10Q8WUB8 498 aaKnown RBP24.4■■□□□ 1.5
C9orf40-201ENST00000376854 TRAV19A0A0A6YYK7 116 aa24.4■■□□□ 1.5
C9orf40-201ENST00000376854 OR2A25A4D2G3 310 aa24.4■■□□□ 1.5
C9orf40-201ENST00000376854 H0YIV9 168 aa24.4■■□□□ 1.5
C9orf40-201ENST00000376854 NTRK1P04629 796 aa24.4■■□□□ 1.5
C9orf40-201ENST00000376854 ANXA4P09525 319 aaPredicted RBP24.4■■□□□ 1.5
C9orf40-201ENST00000376854 RRM2P31350 389 aa24.4■■□□□ 1.5
C9orf40-201ENST00000376854 IFITM3Q01628 133 aa24.4■■□□□ 1.5
C9orf40-201ENST00000376854 RGNQ15493 299 aa24.4■■□□□ 1.5
C9orf40-201ENST00000376854 ADNP2Q6IQ32 1131 aa24.4■■□□□ 1.5
C9orf40-201ENST00000376854 CNKSR3Q6P9H4 555 aa24.4■■□□□ 1.5
C9orf40-201ENST00000376854 AGTRAPQ6RW13 159 aa24.4■■□□□ 1.5
C9orf40-201ENST00000376854 SLC39A5Q6ZMH5 540 aa24.4■■□□□ 1.5
C9orf40-201ENST00000376854 HSD11B1LQ7Z5J1 315 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms