RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 BANF1O75531 89 aa19.93■□□□□ 0.78
VSX1-201ENST00000376707 C8orf89P0DMQ9 161 aa19.93■□□□□ 0.78
VSX1-201ENST00000376707 ICAM2P13598 275 aa19.93■□□□□ 0.78
VSX1-201ENST00000376707 TIAL1Q01085 375 aaKnown RBP eCLIP19.93■□□□□ 0.78
VSX1-201ENST00000376707 SP140Q13342 867 aa19.93■□□□□ 0.78
VSX1-201ENST00000376707 MORF4L2Q15014 288 aa19.93■□□□□ 0.78
VSX1-201ENST00000376707 PCOLCEQ15113 449 aa19.93■□□□□ 0.78
VSX1-201ENST00000376707 MFSD4BQ5TF39 518 aa19.93■□□□□ 0.78
VSX1-201ENST00000376707 AGTRAPQ6RW13 159 aa19.93■□□□□ 0.78
VSX1-201ENST00000376707 TMEM205Q6UW68 189 aa19.93■□□□□ 0.78
VSX1-201ENST00000376707 KIAA0408Q6ZU52 694 aa19.93■□□□□ 0.78
VSX1-201ENST00000376707 VN1R4Q7Z5H5 301 aa19.93■□□□□ 0.78
VSX1-201ENST00000376707 GALNT7Q86SF2 657 aa19.93■□□□□ 0.78
VSX1-201ENST00000376707 C17orf64Q86WR6 236 aa19.93■□□□□ 0.78
VSX1-201ENST00000376707 IGDCC3Q8IVU1 814 aa19.93■□□□□ 0.78
VSX1-201ENST00000376707 BCORP1Q8N888 145 aa19.93■□□□□ 0.78
VSX1-201ENST00000376707 ALKBH8Q96BT7 664 aaKnown RBP19.93■□□□□ 0.78
VSX1-201ENST00000376707 THAP11Q96EK4 314 aa19.93■□□□□ 0.78
VSX1-201ENST00000376707 PARVBQ9HBI1 364 aa19.93■□□□□ 0.78
VSX1-201ENST00000376707 OLAHQ9NV23 265 aa19.93■□□□□ 0.78
VSX1-201ENST00000376707 TRAV17A0A0B4J275 112 aa19.92■□□□□ 0.78
VSX1-201ENST00000376707 NSA2O95478 260 aaKnown RBP19.92■□□□□ 0.78
VSX1-201ENST00000376707 CELA2AP08217 269 aa19.92■□□□□ 0.78
VSX1-201ENST00000376707 CCND1P24385 295 aa19.92■□□□□ 0.78
VSX1-201ENST00000376707 COL8A1P27658 744 aa19.92■□□□□ 0.78
VSX1-201ENST00000376707 GABRB3P28472 473 aa19.92■□□□□ 0.78
VSX1-201ENST00000376707 TNFSF10P50591 281 aa19.92■□□□□ 0.78
VSX1-201ENST00000376707 GNG11P61952 73 aa19.92■□□□□ 0.78
VSX1-201ENST00000376707 SNRPNP63162 240 aaKnown RBP19.92■□□□□ 0.78
VSX1-201ENST00000376707 CSNK1G2P78368 415 aa19.92■□□□□ 0.78
VSX1-201ENST00000376707 MINDY4Q4G0A6 757 aa19.92■□□□□ 0.78
VSX1-201ENST00000376707 PAQR3Q6TCH7 311 aa19.92■□□□□ 0.78
VSX1-201ENST00000376707 MBOAT1Q6ZNC8 495 aa19.92■□□□□ 0.78
VSX1-201ENST00000376707 CAMKVQ8NCB2 501 aa19.92■□□□□ 0.78
VSX1-201ENST00000376707 HAS2Q92819 552 aa19.92■□□□□ 0.78
VSX1-201ENST00000376707 MACROD1Q9BQ69 325 aa19.92■□□□□ 0.78
VSX1-201ENST00000376707 TUBB6Q9BUF5 446 aa19.92■□□□□ 0.78
VSX1-201ENST00000376707 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.92■□□□□ 0.78
VSX1-201ENST00000376707 ATG10Q9H0Y0 220 aa19.92■□□□□ 0.78
VSX1-201ENST00000376707 PLAC1Q9HBJ0 212 aa19.92■□□□□ 0.78
VSX1-201ENST00000376707 PABPN1LA6NDY0 278 aaKnown RBP19.91■□□□□ 0.78
VSX1-201ENST00000376707 SLC16A5O15375 505 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 LRRTM2O43300 516 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 JRKO75564 520 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 HIST1H2AGP0C0S8 130 aaPredicted RBP19.91■□□□□ 0.78
VSX1-201ENST00000376707 ITGAMP11215 1152 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 IL1RNP18510 177 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 HIST1H2ADP20671 130 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 GRK3P35626 688 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 PER3P56645 1201 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 DR1Q01658 176 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 NAE1Q13564 534 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 RBM20Q5T481 1227 aaKnown RBP19.91■□□□□ 0.78
VSX1-201ENST00000376707 PRSS41Q7RTY9 318 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 PDIK1LQ8N165 341 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 ANP32BQ92688 251 aaKnown RBP19.91■□□□□ 0.78
VSX1-201ENST00000376707 LINGO1Q96FE5 620 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 CERS2Q96G23 380 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 HIST1H2AHQ96KK5 128 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 CAPZA3Q96KX2 299 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 NAPGQ99747 312 aaPredicted RBP19.91■□□□□ 0.78
VSX1-201ENST00000376707 HIST1H2AJQ99878 128 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 SLX1AQ9BQ83 275 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 H2AFJQ9BTM1 129 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 VN1R1Q9GZP7 353 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 HCN3Q9P1Z3 774 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 SH2B3Q9UQQ2 575 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 SAR1BQ9Y6B6 198 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 HEATR5BQ9P2D3 2071 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 DOPEY1Q5JWR5 2465 aa19.91■□□□□ 0.78
VSX1-201ENST00000376707 UNC79Q9P2D8 2635 aa19.9■□□□□ 0.78
VSX1-201ENST00000376707 FEZF1A0PJY2 475 aa19.9■□□□□ 0.78
VSX1-201ENST00000376707 F10P00742 488 aa19.9■□□□□ 0.78
VSX1-201ENST00000376707 AHSGP02765 367 aa19.9■□□□□ 0.78
VSX1-201ENST00000376707 XCR1P46094 333 aa19.9■□□□□ 0.78
VSX1-201ENST00000376707 EFNA3P52797 238 aa19.9■□□□□ 0.78
VSX1-201ENST00000376707 CDKN2DP55273 166 aa19.9■□□□□ 0.78
VSX1-201ENST00000376707 INAQ16352 499 aa19.9■□□□□ 0.78
VSX1-201ENST00000376707 BBS9Q3SYG4 887 aa19.9■□□□□ 0.78
VSX1-201ENST00000376707 ABHD17BQ5VST6 288 aa19.9■□□□□ 0.78
VSX1-201ENST00000376707 ZNF787Q6DD87 383 aa19.9■□□□□ 0.78
VSX1-201ENST00000376707 TMEM214Q6NUQ4 689 aaKnown RBP19.9■□□□□ 0.78
VSX1-201ENST00000376707 HIBCHQ6NVY1 386 aaPredicted RBP19.9■□□□□ 0.78
VSX1-201ENST00000376707 ASPGQ86U10 573 aa19.9■□□□□ 0.78
VSX1-201ENST00000376707 KLHL7Q8IXQ5 586 aa19.9■□□□□ 0.78
VSX1-201ENST00000376707 OR51Q1Q8NH59 317 aa19.9■□□□□ 0.78
VSX1-201ENST00000376707 ZCCHC10Q8TBK6 192 aa19.9■□□□□ 0.78
VSX1-201ENST00000376707 LRRC39Q96DD0 335 aa19.9■□□□□ 0.78
VSX1-201ENST00000376707 IMMP1LQ96LU5 166 aa19.9■□□□□ 0.78
VSX1-201ENST00000376707 CYTH2Q99418 400 aa19.9■□□□□ 0.78
VSX1-201ENST00000376707 FAM129AQ9BZQ8 928 aa19.9■□□□□ 0.78
VSX1-201ENST00000376707 ANKHQ9HCJ1 492 aa19.9■□□□□ 0.78
VSX1-201ENST00000376707 PPANQ9NQ55 473 aaKnown RBP19.9■□□□□ 0.78
VSX1-201ENST00000376707 C19orf25Q9UFG5 118 aaPredicted RBP19.9■□□□□ 0.78
VSX1-201ENST00000376707 TEKT2Q9UIF3 430 aa19.9■□□□□ 0.78
VSX1-201ENST00000376707 CCDC188H7C350 402 aa19.89■□□□□ 0.77
VSX1-201ENST00000376707 SGK494L7N484 410 aa19.89■□□□□ 0.77
VSX1-201ENST00000376707 SEC24DO94855 1032 aaPredicted RBP19.89■□□□□ 0.77
VSX1-201ENST00000376707 WDPCPO95876 746 aa19.89■□□□□ 0.77
VSX1-201ENST00000376707 CYC1P08574 325 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms