RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 BRF2Q9HAW0 419 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 PDE7BQ9NP56 450 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 KLHL3Q9UH77 587 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 ZFP69BQ9UJL9 534 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 PILRAQ9UKJ1 303 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 ATXN7L1Q9ULK2 861 aaPredicted RBP21.96■■□□□ 1.11
HLA-C-202ENST00000376237 PPT2Q9UMR5 302 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 ASCC3Q8N3C0 2202 aaKnown RBP21.96■■□□□ 1.11
HLA-C-202ENST00000376237 SLC28A1O00337 649 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 PIP5K1BO14986 540 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 LCMT2O60294 686 aaKnown RBP21.96■■□□□ 1.11
HLA-C-202ENST00000376237 SKAP2O75563 359 aaPredicted RBP21.96■■□□□ 1.11
HLA-C-202ENST00000376237 PDYNP01213 254 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 ANKRD34CP0C6C1 535 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 CDK4P11802 303 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 HTR6P50406 440 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 BTKQ06187 659 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 CSTF3Q12996 717 aaKnown RBP21.96■■□□□ 1.11
HLA-C-202ENST00000376237 SPIDRQ14159 915 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 ABRAXAS2Q15018 415 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 TRIP6Q15654 476 aaKnown RBP21.96■■□□□ 1.11
HLA-C-202ENST00000376237 ZIC1Q15915 447 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 EPGNQ6UW88 154 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 RNF44Q7L0R7 432 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 ANKRD53Q8N9V6 530 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 TRPV3Q8NET8 790 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 NETO1Q8TDF5 533 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 KLHL6Q8WZ60 621 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 MTFMTQ96DP5 389 aaKnown RBP21.96■■□□□ 1.11
HLA-C-202ENST00000376237 ELAC2Q9BQ52 826 aaKnown RBP21.96■■□□□ 1.11
HLA-C-202ENST00000376237 KLHL25Q9H0H3 589 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 SYNDIG1Q9H7V2 258 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 TMEM9Q9P0T7 183 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 BTRCQ9Y297 605 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 PCDHGA4Q9Y5G9 962 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 AP1M2Q9Y6Q5 423 aa21.96■■□□□ 1.11
HLA-C-202ENST00000376237 CTSVO60911 334 aa21.95■■□□□ 1.1
HLA-C-202ENST00000376237 BCL6P41182 706 aa21.95■■□□□ 1.1
HLA-C-202ENST00000376237 ARL4DP49703 201 aa21.95■■□□□ 1.1
HLA-C-202ENST00000376237 NEK2P51955 445 aa21.95■■□□□ 1.1
HLA-C-202ENST00000376237 HSD11B2P80365 405 aa21.95■■□□□ 1.1
HLA-C-202ENST00000376237 SGO1Q5FBB7 561 aa21.95■■□□□ 1.1
HLA-C-202ENST00000376237 ZNF574Q6ZN55 896 aaPredicted RBP21.95■■□□□ 1.1
HLA-C-202ENST00000376237 SPATA21Q7Z572 469 aa21.95■■□□□ 1.1
HLA-C-202ENST00000376237 PLD3Q8IV08 490 aa21.95■■□□□ 1.1
HLA-C-202ENST00000376237 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.95■■□□□ 1.1
HLA-C-202ENST00000376237 ZNF473Q8WTR7 871 aaKnown RBP21.95■■□□□ 1.1
HLA-C-202ENST00000376237 PRR11Q96HE9 360 aaPredicted RBP21.95■■□□□ 1.1
HLA-C-202ENST00000376237 OR2A5Q96R48 311 aa21.95■■□□□ 1.1
HLA-C-202ENST00000376237 ZNF768Q9H5H4 540 aaKnown RBP21.95■■□□□ 1.1
HLA-C-202ENST00000376237 FARSBQ9NSD9 589 aaKnown RBP21.95■■□□□ 1.1
HLA-C-202ENST00000376237 RIC8BQ9NVN3 520 aa21.95■■□□□ 1.1
HLA-C-202ENST00000376237 NMRK1Q9NWW6 199 aa21.95■■□□□ 1.1
HLA-C-202ENST00000376237 DCTN4Q9UJW0 460 aa21.95■■□□□ 1.1
HLA-C-202ENST00000376237 APOBEC2Q9Y235 224 aaKnown RBP21.95■■□□□ 1.1
HLA-C-202ENST00000376237 D6RAR5 112 aa21.94■■□□□ 1.1
HLA-C-202ENST00000376237 RGS14O43566 566 aa21.94■■□□□ 1.1
HLA-C-202ENST00000376237 SNX3O60493 162 aa21.94■■□□□ 1.1
HLA-C-202ENST00000376237 VPS4BO75351 444 aa21.94■■□□□ 1.1
HLA-C-202ENST00000376237 CLEC3AO75596 197 aa21.94■■□□□ 1.1
HLA-C-202ENST00000376237 RFPL3O75679 317 aa21.94■■□□□ 1.1
HLA-C-202ENST00000376237 LINC00032P0C843 101 aa21.94■■□□□ 1.1
HLA-C-202ENST00000376237 THRAP10827 490 aa21.94■■□□□ 1.1
HLA-C-202ENST00000376237 TRA2AQ13595 282 aaKnown RBP eCLIP21.94■■□□□ 1.1
HLA-C-202ENST00000376237 MAVSQ7Z434 540 aa21.94■■□□□ 1.1
HLA-C-202ENST00000376237 ARHGAP22Q7Z5H3 698 aa21.94■■□□□ 1.1
HLA-C-202ENST00000376237 RFWD2Q8NHY2 731 aa21.94■■□□□ 1.1
HLA-C-202ENST00000376237 SLC41A2Q96JW4 573 aa21.94■■□□□ 1.1
HLA-C-202ENST00000376237 MTERF1Q99551 399 aaKnown RBP21.94■■□□□ 1.1
HLA-C-202ENST00000376237 PRM3Q9NNZ6 103 aa21.94■■□□□ 1.1
HLA-C-202ENST00000376237 SOHLH2Q9NX45 425 aa21.94■■□□□ 1.1
HLA-C-202ENST00000376237 ASXL3Q9C0F0 2248 aa21.93■■□□□ 1.1
HLA-C-202ENST00000376237 A0A0G2JND7 137 aa21.93■■□□□ 1.1
HLA-C-202ENST00000376237 IGHV5-10-1A0A0J9YXX1 117 aa21.93■■□□□ 1.1
HLA-C-202ENST00000376237 NRP2O60462 931 aa21.93■■□□□ 1.1
HLA-C-202ENST00000376237 SRPX2O60687 465 aaPredicted RBP21.93■■□□□ 1.1
HLA-C-202ENST00000376237 JUNP05412 331 aaKnown RBP21.93■■□□□ 1.1
HLA-C-202ENST00000376237 CSRP1P21291 193 aaKnown RBP21.93■■□□□ 1.1
HLA-C-202ENST00000376237 PTX3P26022 381 aaPredicted RBP21.93■■□□□ 1.1
HLA-C-202ENST00000376237 MLLT3P42568 568 aaPredicted RBP21.93■■□□□ 1.1
HLA-C-202ENST00000376237 DDX39BQ13838 428 aaKnown RBP21.93■■□□□ 1.1
HLA-C-202ENST00000376237 IMPG1Q17R60 797 aa21.93■■□□□ 1.1
HLA-C-202ENST00000376237 XKR7Q5GH72 579 aa21.93■■□□□ 1.1
HLA-C-202ENST00000376237 SNAP47Q5SQN1 464 aa21.93■■□□□ 1.1
HLA-C-202ENST00000376237 TMPRSS9Q7Z410 1059 aa21.93■■□□□ 1.1
HLA-C-202ENST00000376237 PIGWQ7Z7B1 504 aa21.93■■□□□ 1.1
HLA-C-202ENST00000376237 DNAJC22Q8N4W6 341 aa21.93■■□□□ 1.1
HLA-C-202ENST00000376237 RERGQ96A58 199 aaPredicted RBP21.93■■□□□ 1.1
HLA-C-202ENST00000376237 THOC1Q96FV9 657 aaKnown RBP21.93■■□□□ 1.1
HLA-C-202ENST00000376237 MAELQ96JY0 434 aaKnown RBP21.93■■□□□ 1.1
HLA-C-202ENST00000376237 KCNK13Q9HB14 408 aa21.93■■□□□ 1.1
HLA-C-202ENST00000376237 FAM60AQ9NP50 221 aa21.93■■□□□ 1.1
HLA-C-202ENST00000376237 DMRT3Q9NQL9 472 aa21.93■■□□□ 1.1
HLA-C-202ENST00000376237 RP1P56715 2156 aa21.93■■□□□ 1.1
HLA-C-202ENST00000376237 A0A0J9YVX5 310 aa21.92■■□□□ 1.1
HLA-C-202ENST00000376237 MAGEB17A8MXT2 336 aa21.92■■□□□ 1.1
HLA-C-202ENST00000376237 CASC3O15234 703 aaKnown RBP21.92■■□□□ 1.1
HLA-C-202ENST00000376237 GFRA3O60609 400 aa21.92■■□□□ 1.1
HLA-C-202ENST00000376237 DIAPH2O60879 1101 aa21.92■■□□□ 1.1
HLA-C-202ENST00000376237 MSL3P1P0C860 447 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms