RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 PHF10Q8WUB8 498 aaKnown RBP14.06□□□□□ -0.16
MSH5-201ENST00000375703 MRPS31Q92665 395 aaKnown RBP14.06□□□□□ -0.16
MSH5-201ENST00000375703 RPL3LQ92901 407 aaKnown RBP14.06□□□□□ -0.16
MSH5-201ENST00000375703 ADPRHL2Q9NX46 363 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 PNMA8BQ9ULN7 279 aaPredicted RBP14.06□□□□□ -0.16
MSH5-201ENST00000375703 PCDHGB3Q9Y5G1 929 aa14.06□□□□□ -0.16
MSH5-201ENST00000375703 E7EQ34 232 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 NTRK1P04629 796 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 INHAP05111 366 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 AQP1P29972 269 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 CSNK2BP67870 215 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 KCNJ10P78508 379 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 KCNC3Q14003 757 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 NEK10Q6ZWH5 1172 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 GAREM2Q75VX8 874 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 P3H2Q8IVL5 708 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 ENTHD1Q8IYW4 607 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 STARD8Q92502 1023 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 CLP1Q92989 425 aaKnown RBP14.05□□□□□ -0.16
MSH5-201ENST00000375703 SCAMP4Q969E2 229 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 EPYCQ99645 322 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 PITX2Q99697 317 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 HS3ST2Q9Y278 367 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 NUP214P35658 2090 aaPredicted RBP14.05□□□□□ -0.16
MSH5-201ENST00000375703 A0A1W2PQ67 120 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 OR2A25A4D2G3 310 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 SCAMP2O15127 329 aaKnown RBP14.05□□□□□ -0.16
MSH5-201ENST00000375703 ANXA4P09525 319 aaPredicted RBP14.05□□□□□ -0.16
MSH5-201ENST00000375703 HLA-FP30511 346 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 RRM2P31350 389 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 NAE1Q13564 534 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 MINDY2Q8NBR6 621 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 CD99L2Q8TCZ2 262 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 APH1BQ8WW43 257 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 MAL2Q969L2 176 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 MED8Q96G25 268 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 HRASLS5Q96KN8 279 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 EPS8L2Q9H6S3 715 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 SGK2Q9HBY8 427 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 SLCO3A1Q9UIG8 710 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 PCDHGA6Q9Y5G7 932 aa14.05□□□□□ -0.16
MSH5-201ENST00000375703 OR2AG2A6NM03 316 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 EFCAB9A8MZ26 197 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 DPM1O60762 260 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 VIPP01282 170 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 C21orf58P58505 322 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 POLR2LP62875 67 aaKnown RBP14.04□□□□□ -0.16
MSH5-201ENST00000375703 FADDQ13158 208 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 RGNQ15493 299 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 GPR153Q6NV75 609 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 C1orf52Q8N6N3 182 aaKnown RBP14.04□□□□□ -0.16
MSH5-201ENST00000375703 DNASE1L2Q92874 299 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 ZHX1-C8orf76Q96EF9 292 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 KCNC2Q96PR1 638 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 SPATA9Q9BWV2 254 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 EMILIN2Q9BXX0 1053 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 FAM83DQ9H4H8 585 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 BTNL2Q9UIR0 455 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 CLDN24A6NM45 220 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 PQBP1O60828 265 aaKnown RBP14.04□□□□□ -0.16
MSH5-201ENST00000375703 URODP06132 367 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 PPIBP23284 216 aaKnown RBP14.04□□□□□ -0.16
MSH5-201ENST00000375703 TGFBR1P36897 503 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 ASMTP46597 345 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 HKDC1Q2TB90 917 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 ANXA8L1Q5VT79 327 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 AGTRAPQ6RW13 159 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 NAGSQ8N159 534 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 CHST14Q8NCH0 376 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 ITPKCQ96DU7 683 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 C11orf24Q96F05 449 aaPredicted RBP14.04□□□□□ -0.16
MSH5-201ENST00000375703 COPS4Q9BT78 406 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 DOHHQ9BU89 302 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 SLIRPQ9GZT3 109 aaKnown RBP14.04□□□□□ -0.16
MSH5-201ENST00000375703 SH3BP4Q9P0V3 963 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 CORO2BQ9UQ03 480 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 RNF6Q9Y252 685 aa14.04□□□□□ -0.16
MSH5-201ENST00000375703 MGAT4DA6NG13 374 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 ARHGEF33A8MVX0 844 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 H0YIV9 168 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 SGTAO43765 313 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 SLCO2B1O94956 709 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 ETHE1O95571 254 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 TGFBR2P37173 567 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 HNF4AP41235 474 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 MAGEA10P43363 369 aaPredicted RBP14.03□□□□□ -0.16
MSH5-201ENST00000375703 RXRGP48443 463 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 GSSP48637 474 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 CLK1P49759 484 aaKnown RBP14.03□□□□□ -0.16
MSH5-201ENST00000375703 CRYBA2P53672 197 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 RAE1P78406 368 aaKnown RBP14.03□□□□□ -0.16
MSH5-201ENST00000375703 SLC7A9P82251 487 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 FPGSQ05932 587 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 DNASE1L3Q13609 305 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 SYT16Q17RD7 645 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.03□□□□□ -0.166e-7■■■■□ 21
MSH5-201ENST00000375703 ZNF648Q5T619 568 aaPredicted RBP14.03□□□□□ -0.16
MSH5-201ENST00000375703 UBE2UQ5VVX9 321 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 Q6ZPB1 254 aaPredicted RBP14.03□□□□□ -0.16
MSH5-201ENST00000375703 SPPL2AQ8TCT8 520 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms