RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 DSN1Q9H410 356 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 DNAJC27Q9NZQ0 273 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 USP3Q9Y6I4 520 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 LTBP3Q9NS15 1303 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 UBE2QL1A1L167 161 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 OR1F1O43749 312 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 GJB5O95377 273 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 SAGP10523 405 aaPredicted RBP16.29■□□□□ 0.2
VARS-215ENST00000375663 CDK5R2Q13319 367 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 SUZ12Q15022 739 aaKnown RBP16.29■□□□□ 0.2
VARS-215ENST00000375663 GPRC6AQ5T6X5 926 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 SLC35G5Q96KT7 338 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 UBXN10Q96LJ8 280 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 RNF208Q9H0X6 261 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 TMEM138Q9NPI0 162 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 RHCGQ9UBD6 479 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 DPP7Q9UHL4 492 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 YIPF1Q9Y548 306 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 CCRL2O00421 344 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 CNMDO75829 334 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 SLITRK5O94991 958 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 STSP08842 583 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 SLC2A2P11168 524 aaPredicted RBP16.29■□□□□ 0.2
VARS-215ENST00000375663 SUN5Q8TC36 379 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 SLC9A6Q92581 669 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 ASPNQ9BXN1 380 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 MAT2BQ9NZL9 334 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 BCHEP06276 602 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 DPP6P42658 865 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 ABATP80404 500 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 FAM189BP81408 668 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 ZNF630Q2M218 657 aaPredicted RBP16.29■□□□□ 0.2
VARS-215ENST00000375663 NHSL2Q5HYW2 709 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 CEACAM20Q6UY09 585 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 TSPYL5Q86VY4 417 aaPredicted RBP16.29■□□□□ 0.2
VARS-215ENST00000375663 BARD1Q99728 777 aaKnown RBP16.29■□□□□ 0.2
VARS-215ENST00000375663 RIOK2Q9BVS4 552 aaKnown RBP16.29■□□□□ 0.2
VARS-215ENST00000375663 OR51B5Q9H339 312 aa16.29■□□□□ 0.2
VARS-215ENST00000375663 A0A0G2JN53 185 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 KRBA1A5PL33 1030 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 TLX2O43763 284 aaPredicted RBP16.28■□□□□ 0.2
VARS-215ENST00000375663 GABBR2O75899 941 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 CXCL14O95715 111 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 LAMP2P13473 410 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 CYP27C1Q4G0S4 372 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 CARD16Q5EG05 197 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 MARCH8Q5T0T0 291 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 SLC30A8Q8IWU4 369 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 TRIT1Q9H3H1 467 aaKnown RBP16.28■□□□□ 0.2
VARS-215ENST00000375663 C14orf119Q9NWQ9 140 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 SLC45A1Q9Y2W3 748 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 PCDHB14Q9Y5E9 798 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 A8MV72 311 aaPredicted RBP16.28■□□□□ 0.2
VARS-215ENST00000375663 C6orf47O95873 294 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 SRPRAP08240 638 aaKnown RBP16.28■□□□□ 0.2
VARS-215ENST00000375663 RPS13P62277 151 aaKnown RBP16.28■□□□□ 0.2
VARS-215ENST00000375663 SF1Q15637 639 aaKnown RBP16.28■□□□□ 0.2
VARS-215ENST00000375663 PIANPQ8IYJ0 282 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 GPR150Q8NGU9 434 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 NETO1Q8TDF5 533 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 MGLLQ99685 303 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 KCNN2Q9H2S1 579 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 THG1LQ9NWX6 298 aaKnown RBP16.28■□□□□ 0.2
VARS-215ENST00000375663 ITM2BQ9Y287 266 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 GPSM3Q9Y4H4 160 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 HSPE1-MOB4S4R3N1 261 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 NUP205Q92621 2012 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 PRMT3O60678 531 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 CSF2P04141 144 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 RETP07949 1114 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 PPM1AP35813 382 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 PIK3CBP42338 1070 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 MAGEA12P43365 314 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 APLP1P51693 650 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 ZNF181Q2M3W8 571 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 WSCD2Q2TBF2 565 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 SHQ1Q6PI26 577 aaKnown RBP16.28■□□□□ 0.2
VARS-215ENST00000375663 SYCE2Q6PIF2 218 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 RNF44Q7L0R7 432 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 DCP2Q8IU60 420 aaKnown RBP16.28■□□□□ 0.2
VARS-215ENST00000375663 GJD3Q8N144 294 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 OR2AG1Q9H205 316 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 NEK6Q9HC98 313 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 PRAMEF33A0A0G2JMD5 474 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 SMIM30A4D0T7 59 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 PRAMEF10O60809 474 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 LCKP06239 509 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 CD97P48960 835 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 TAS2R50P59544 299 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 ZSWIM9Q86XI8 627 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 C3orf58Q8NDZ4 430 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 CD200R1Q8TD46 325 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 SH3YL1Q96HL8 342 aaPredicted RBP16.28■□□□□ 0.2
VARS-215ENST00000375663 DOHHQ9BU89 302 aa16.28■□□□□ 0.2
VARS-215ENST00000375663 ZNF195O14628 629 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 TPD52L2O43399 206 aaKnown RBP16.27■□□□□ 0.2
VARS-215ENST00000375663 NOS1APO75052 506 aaPredicted RBP16.27■□□□□ 0.2
VARS-215ENST00000375663 KHDRBS3O75525 346 aaKnown RBP16.27■□□□□ 0.2
VARS-215ENST00000375663 RFPL2O75678 378 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 FYNP06241 537 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms