RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 ZNF557Q8N988 423 aaPredicted RBP11.77□□□□□ -0.52
C9orf3-203ENST00000375315 TESCQ96BS2 214 aa11.77□□□□□ -0.52
C9orf3-203ENST00000375315 SIGLEC11Q96RL6 698 aa11.77□□□□□ -0.52
C9orf3-203ENST00000375315 SLC9A7Q96T83 725 aa11.77□□□□□ -0.52
C9orf3-203ENST00000375315 RNF167Q9H6Y7 350 aa11.77□□□□□ -0.52
C9orf3-203ENST00000375315 SMURF1Q9HCE7 757 aa11.77□□□□□ -0.52
C9orf3-203ENST00000375315 NT5MQ9NPB1 228 aa11.77□□□□□ -0.52
C9orf3-203ENST00000375315 RASSF1Q9NS23 344 aa11.77□□□□□ -0.52
C9orf3-203ENST00000375315 RBM22Q9NW64 420 aaKnown RBP eCLIP11.77□□□□□ -0.521e-10■■■□□ 17.4
C9orf3-203ENST00000375315 SLC23A1Q9UHI7 598 aa11.77□□□□□ -0.52
C9orf3-203ENST00000375315 TRHDEQ9UKU6 1024 aa11.77□□□□□ -0.52
C9orf3-203ENST00000375315 AUP1Q9Y679 476 aa11.77□□□□□ -0.52
C9orf3-203ENST00000375315 REV3LO60673 3130 aa11.77□□□□□ -0.52
C9orf3-203ENST00000375315 A0A0D9SEW6 157 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 HOXB6P17509 224 aaKnown RBP11.77□□□□□ -0.53
C9orf3-203ENST00000375315 AZGP1P25311 298 aaKnown RBP11.77□□□□□ -0.53
C9orf3-203ENST00000375315 SMAD3P84022 425 aaKnown RBP11.77□□□□□ -0.53
C9orf3-203ENST00000375315 FOXD4Q12950 439 aaPredicted RBP11.77□□□□□ -0.53
C9orf3-203ENST00000375315 PAFAH1B3Q15102 231 aaKnown RBP11.77□□□□□ -0.53
C9orf3-203ENST00000375315 TIMM50Q3ZCQ8 353 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 HECTD3Q5T447 861 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 PRSS42Q7Z5A4 293 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 DPP10Q8N608 796 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 TTC29Q8NA56 475 aaPredicted RBP11.77□□□□□ -0.53
C9orf3-203ENST00000375315 C2CD4AQ8NCU7 369 aaPredicted RBP11.77□□□□□ -0.53
C9orf3-203ENST00000375315 OR7D4Q8NG98 312 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 POF1BQ8WVV4 589 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 MYDGFQ969H8 173 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 PSMG2Q969U7 264 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 HMCESQ96FZ2 354 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 NECTIN4Q96NY8 510 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 MUTYHQ9UIF7 546 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 ZNF840PA6NDX5 716 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 PRR23AA6NEV1 266 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 EFCAB10A6NFE3 127 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 PSMD3O43242 534 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 WDR47O94967 919 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 C8AP07357 584 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 ZNF250P15622 560 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 ZNF37AP17032 561 aaPredicted RBP11.77□□□□□ -0.53
C9orf3-203ENST00000375315 CORO1AP31146 461 aaKnown RBP11.77□□□□□ -0.53
C9orf3-203ENST00000375315 SGSHP51688 502 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 FOXA1P55317 472 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 OLR1P78380 273 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 NTHL1P78549 312 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 RGS1Q08116 209 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 DBPQ10586 325 aaPredicted RBP11.77□□□□□ -0.53
C9orf3-203ENST00000375315 HYAL2Q12891 473 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 MRPL28Q13084 256 aaKnown RBP11.77□□□□□ -0.53
C9orf3-203ENST00000375315 BAMBIQ13145 260 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 PRKG2Q13237 762 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 PON2Q15165 354 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 BAK1Q16611 211 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 SOWAHCQ53LP3 525 aaPredicted RBP11.77□□□□□ -0.53
C9orf3-203ENST00000375315 ZNF782Q6ZMW2 699 aaPredicted RBP11.77□□□□□ -0.53
C9orf3-203ENST00000375315 OR8H3Q8N146 312 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 CYP4Z2PQ8N1L4 340 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 PPHLN1Q8NEY8 458 aaKnown RBP11.77□□□□□ -0.53
C9orf3-203ENST00000375315 ENKURQ8TC29 256 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 TUBB1Q9H4B7 451 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 ZIM2Q9NZV7 527 aa11.77□□□□□ -0.53
C9orf3-203ENST00000375315 ANKRD12Q6UB98 2062 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 A0A1W2PRG6 482 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 PAPSS2O95340 614 aaPredicted RBP11.76□□□□□ -0.53
C9orf3-203ENST00000375315 LRG1P02750 347 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 KLKB1P03952 638 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 HMGA1P17096 107 aaKnown RBP11.76□□□□□ -0.53
C9orf3-203ENST00000375315 CPN2P22792 545 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 GRK5P34947 590 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 EPHB3P54753 998 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 NFKB2Q00653 900 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 TEKQ02763 1124 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 TYW3Q6IPR3 259 aaKnown RBP11.76□□□□□ -0.53
C9orf3-203ENST00000375315 SHQ1Q6PI26 577 aaKnown RBP11.76□□□□□ -0.53
C9orf3-203ENST00000375315 BRAT1Q6PJG6 821 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 C16orf62Q7Z3J2 963 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 ING5Q8WYH8 240 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 EXT2Q93063 718 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 GIMAP5Q96F15 307 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 MAGIXQ9H6Y5 334 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 UTS2RQ9UKP6 389 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 INSL5Q9Y5Q6 135 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 FNDC1Q4ZHG4 1894 aaPredicted RBP11.76□□□□□ -0.53
C9orf3-203ENST00000375315 KIAA0513O60268 411 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 SEC22BO75396 215 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 SCELO95171 688 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 CA3P07451 260 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 PIRTP0C851 137 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 SLC6A4P31645 630 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 CHRNA4P43681 627 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 ZFP36L2P47974 494 aaKnown RBP11.76□□□□□ -0.53
C9orf3-203ENST00000375315 CLCN5P51795 746 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 MAB21L1Q13394 359 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 PPIGQ13427 754 aaKnown RBP eCLIP11.76□□□□□ -0.532e-8■□□□□ 10.5
C9orf3-203ENST00000375315 C1orf53Q5VUE5 145 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 NADSYN1Q6IA69 706 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 ESRP1Q6NXG1 681 aaKnown RBP11.76□□□□□ -0.53
C9orf3-203ENST00000375315 PAMR1Q6UXH9 720 aa11.76□□□□□ -0.53
C9orf3-203ENST00000375315 LINGO4Q6UY18 593 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms