RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 CDK15Q96Q40 435 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 SEMA4BQ9NPR2 832 aaPredicted RBP6.44□□□□□ -1.38
UBR4-204ENST00000375254 PCDHAC2Q9Y5I4 1007 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 KLK4Q9Y5K2 254 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 TEX14Q8IWB6 1497 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 ZNF543Q08ER8 600 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 TDRD10Q5VZ19 366 aaKnown RBP6.44□□□□□ -1.38
UBR4-204ENST00000375254 DDX53Q86TM3 631 aaKnown RBP6.44□□□□□ -1.38
UBR4-204ENST00000375254 ZNF227Q86WZ6 799 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 EID2Q8N6I1 236 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 SLC30A7Q8NEW0 376 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 PRKAB1Q9Y478 270 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 WIF1Q9Y5W5 379 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 ADORA2BP29275 332 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 GFOD2Q3B7J2 385 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 OR13C2Q8NGS9 318 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 MITD1Q8WV92 249 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 SAP130Q9H0E3 1048 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 JRKO75564 520 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 RPP14O95059 124 aaKnown RBP6.44□□□□□ -1.38
UBR4-204ENST00000375254 H1F0P07305 194 aaKnown RBP6.44□□□□□ -1.38
UBR4-204ENST00000375254 CSF1P09603 554 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 STAG3L2P0CL84 134 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 HSD3B2P26439 372 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 PTPN11Q06124 597 aaPredicted RBP6.44□□□□□ -1.38
UBR4-204ENST00000375254 PRPF38BQ5VTL8 546 aaKnown RBP6.44□□□□□ -1.38
UBR4-204ENST00000375254 LIX1Q8N485 282 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 ERVK13-1Q9NX77 482 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 CNOT2Q9NZN8 540 aaKnown RBP6.44□□□□□ -1.38
UBR4-204ENST00000375254 SEC14L3Q9UDX4 400 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 WASHC1A8K0Z3 465 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 P2RX6O15547 441 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 B4GAT1O43505 415 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 PGAM2P15259 253 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 CDK3Q00526 305 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 CD276Q5ZPR3 534 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 GPR153Q6NV75 609 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 UBA3Q8TBC4 463 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 MGLLQ99685 303 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 MECRQ9BV79 373 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 PCED1AQ9H1Q7 454 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 LRFN1Q9P244 771 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 CAPN14A8MX76 684 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 M0R143 59 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 TUBP50607 506 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 RAB13P51153 203 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 ST8SIA6P61647 398 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 TTLL4Q14679 1199 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 DUSP7Q16829 419 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 XKR4Q5GH76 650 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 C4orf19Q8IY42 314 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 LPAR1Q92633 364 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 RANBP9Q96S59 729 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 ARHGAP39Q9C0H5 1083 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 FLRT1Q9NZU1 646 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 PLEKHM1Q9Y4G2 1056 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 hCG_1818297A0A087WSY0 165 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 OR6C74A6NCV1 312 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 BPNT1O95861 308 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 A1BGP04217 495 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 TFAP2AP05549 437 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 SERPINA4P29622 427 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 RPL9P32969 192 aaKnown RBP6.44□□□□□ -1.38
UBR4-204ENST00000375254 RBMXP38159 391 aaKnown RBP6.44□□□□□ -1.38
UBR4-204ENST00000375254 GAS6Q14393 721 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 GID4Q8IVV7 300 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 LGI2Q8N0V4 545 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 LHPPQ9H008 270 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 GSKIPQ9P0R6 139 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 GRXCR2A6NFK2 248 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 CLIC1O00299 241 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 B4GALT4O60513 344 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 YBX3P16989 372 aaKnown RBP eCLIP6.44□□□□□ -1.386e-9■■□□□ 13.1
UBR4-204ENST00000375254 SYN1P17600 705 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 EMX2Q04743 252 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 CLCQ05315 142 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 TCP10Q12799 353 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 MTM1Q13496 603 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 MEF2DQ14814 521 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 SF1Q15637 639 aaKnown RBP6.44□□□□□ -1.38
UBR4-204ENST00000375254 MEP1AQ16819 746 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 ALG10Q5BKT4 473 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 JAZF1Q86VZ6 243 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 MARCH9Q86YJ5 346 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 COA1Q9GZY4 146 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 FBXO44Q9H4M3 255 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 SLC28A3Q9HAS3 691 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 ELL3Q9HB65 397 aaPredicted RBP6.44□□□□□ -1.38
UBR4-204ENST00000375254 STAU1O95793 577 aaKnown RBP6.44□□□□□ -1.38
UBR4-204ENST00000375254 EPOP01588 193 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 TEX44Q53QW1 395 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 ZDHHC24Q6UX98 284 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 OR4C5Q8NGB2 326 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 NCOR1P1Q9H4R4 102 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 AIG1Q9NVV5 245 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 LCHNA4D1U4 455 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 MOXD2PA6NHM9 499 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 CATP04040 527 aaKnown RBP6.44□□□□□ -1.38
UBR4-204ENST00000375254 USP17L8P0C7I0 530 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 SEMA5AQ13591 1074 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms