RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 H3BMQ9 156 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 FOXE1O00358 373 aaPredicted RBP11.81□□□□□ -0.52
UBR4-203ENST00000375225 RNASET2O00584 256 aaKnown RBP11.81□□□□□ -0.52
UBR4-203ENST00000375225 HOXC11O43248 304 aaPredicted RBP11.81□□□□□ -0.52
UBR4-203ENST00000375225 TSPAN6O43657 245 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 MTX2O75431 263 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 SEC14L2O76054 403 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 CPSF4O95639 269 aaKnown RBP11.81□□□□□ -0.52
UBR4-203ENST00000375225 CYP17A1P05093 508 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 GSNP06396 782 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 ABCB1P08183 1280 aaPredicted RBP11.81□□□□□ -0.52
UBR4-203ENST00000375225 ANXA4P09525 319 aaPredicted RBP11.81□□□□□ -0.52
UBR4-203ENST00000375225 ELK4P28324 431 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 PCSK6P29122 969 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 SHMT2P34897 504 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 CXCR4P61073 352 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 PHC1P78364 1004 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 DDX39BQ13838 428 aaKnown RBP11.81□□□□□ -0.52
UBR4-203ENST00000375225 SPIDRQ14159 915 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 UGT8Q16880 541 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 LRRC73Q5JTD7 316 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 TMEM220Q6QAJ8 160 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 LIPIQ6XZB0 460 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 CBLL1Q75N03 491 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 PIWIL3Q7Z3Z3 882 aaKnown RBP11.81□□□□□ -0.52
UBR4-203ENST00000375225 DCP2Q8IU60 420 aaKnown RBP11.81□□□□□ -0.52
UBR4-203ENST00000375225 YAF2Q8IY57 180 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 ZZZ3Q8IYH5 903 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 SVOPQ8N4V2 548 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 NATD1Q8N6N6 113 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 FAM86B1Q8N7N1 296 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 PIK3C3Q8NEB9 887 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 MIPOL1Q8TD10 442 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 OR8D1Q8WZ84 308 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 MRGPRX3Q96LB0 322 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 COG8Q96MW5 612 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 EBPLQ9BY08 206 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 PRO3102Q9H379 93 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 TRIT1Q9H3H1 467 aaKnown RBP11.81□□□□□ -0.52
UBR4-203ENST00000375225 SMURF2Q9HAU4 748 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 FANCEQ9HB96 536 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 DYRK4Q9NR20 520 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 TBC1D23Q9NUY8 699 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 SIRT5Q9NXA8 310 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 CLDND1Q9NY35 253 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 EBF1Q9UH73 591 aa11.81□□□□□ -0.52
UBR4-203ENST00000375225 TRANK1O15050 2925 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 DENND4AQ7Z401 1863 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 C17orf113A0A1B0GUU1 675 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 ANKRD33BA6NCL7 494 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 NOBOXO60393 691 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 BCL10O95999 233 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 IFNA14P01570 189 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 TACR1P25103 407 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 PTPN6P29350 595 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 TIA1P31483 386 aaKnown RBP eCLIP11.8□□□□□ -0.52
UBR4-203ENST00000375225 CDKN2CP42773 168 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 RBBP4Q09028 425 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 NKG7Q16617 165 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 LRIT3Q3SXY7 679 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 RASGEF1AQ8N9B8 481 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 C11orf65Q8NCR3 313 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 CHDHQ8NE62 594 aaPredicted RBP11.8□□□□□ -0.52
UBR4-203ENST00000375225 TMIEQ8NEW7 156 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 CDC26Q8NHZ8 85 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 SETD7Q8WTS6 366 aaKnown RBP11.8□□□□□ -0.52
UBR4-203ENST00000375225 CYB5D2Q8WUJ1 264 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 BORCS5Q969J3 196 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 RSPRY1Q96DX4 576 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 MTERF3Q96E29 417 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 WDR34Q96EX3 536 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 DTD2Q96FN9 168 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 NODALQ96S42 347 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 PKP4Q99569 1192 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 GPN2Q9H9Y4 310 aaPredicted RBP11.8□□□□□ -0.52
UBR4-203ENST00000375225 CARS2Q9HA77 564 aaKnown RBP11.8□□□□□ -0.52
UBR4-203ENST00000375225 TPT1P8Q9HAU6 139 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 FBXO10Q9UK96 956 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 SLC27A6Q9Y2P4 619 aa11.8□□□□□ -0.52
UBR4-203ENST00000375225 LAMA2P24043 3122 aaKnown RBP11.79□□□□□ -0.52
UBR4-203ENST00000375225 EDDM13A0A1B0GTR0 161 aa11.79□□□□□ -0.52
UBR4-203ENST00000375225 GNG14A0A1W2PPG7 69 aa11.79□□□□□ -0.52
UBR4-203ENST00000375225 FADS2P1A8MWK0 482 aa11.79□□□□□ -0.52
UBR4-203ENST00000375225 MYO1GB0I1T2 1018 aa11.79□□□□□ -0.52
UBR4-203ENST00000375225 SUV39H1O43463 412 aa11.79□□□□□ -0.52
UBR4-203ENST00000375225 VEGFDO43915 354 aa11.79□□□□□ -0.52
UBR4-203ENST00000375225 PCDH7O60245 1069 aa11.79□□□□□ -0.52
UBR4-203ENST00000375225 JRKO75564 520 aa11.79□□□□□ -0.52
UBR4-203ENST00000375225 KCNK5O95279 499 aa11.79□□□□□ -0.52
UBR4-203ENST00000375225 RPN2P04844 631 aa11.79□□□□□ -0.52
UBR4-203ENST00000375225 ITGA2P17301 1181 aa11.79□□□□□ -0.52
UBR4-203ENST00000375225 ITIH1P19827 911 aa11.79□□□□□ -0.52
UBR4-203ENST00000375225 ITGB7P26010 798 aa11.79□□□□□ -0.52
UBR4-203ENST00000375225 IMPA1P29218 277 aa11.79□□□□□ -0.52
UBR4-203ENST00000375225 PCGF2P35227 344 aa11.79□□□□□ -0.52
UBR4-203ENST00000375225 ITGA1P56199 1179 aa11.79□□□□□ -0.52
UBR4-203ENST00000375225 IL5RAQ01344 420 aa11.79□□□□□ -0.52
UBR4-203ENST00000375225 MVKQ03426 396 aa11.79□□□□□ -0.52
UBR4-203ENST00000375225 ZNF763Q0D2J5 394 aa11.79□□□□□ -0.52
UBR4-203ENST00000375225 E2F2Q14209 437 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms