RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 AP1S1P61966 158 aa15.83■□□□□ 0.12
SDC4-201ENST00000372733 CSNK2BP67870 215 aa15.83■□□□□ 0.12
SDC4-201ENST00000372733 ZNF45Q02386 682 aa15.83■□□□□ 0.12
SDC4-201ENST00000372733 HSPA14Q0VDF9 509 aa15.83■□□□□ 0.12
SDC4-201ENST00000372733 ARMCX4Q5H9R4 360 aa15.83■□□□□ 0.12
SDC4-201ENST00000372733 FUT10Q6P4F1 479 aa15.83■□□□□ 0.12
SDC4-201ENST00000372733 GPR26Q8NDV2 337 aa15.83■□□□□ 0.12
SDC4-201ENST00000372733 OR52J3Q8NH60 311 aa15.83■□□□□ 0.12
SDC4-201ENST00000372733 SPPL2AQ8TCT8 520 aa15.83■□□□□ 0.12
SDC4-201ENST00000372733 FKBP14Q9NWM8 211 aa15.83■□□□□ 0.12
SDC4-201ENST00000372733 SPASTQ9UBP0 616 aa15.83■□□□□ 0.12
SDC4-201ENST00000372733 PCDHGB6Q9Y5F9 930 aa15.83■□□□□ 0.12
SDC4-201ENST00000372733 LYVE1Q9Y5Y7 322 aa15.83■□□□□ 0.12
SDC4-201ENST00000372733 SUV39H1O43463 412 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 SH3BGRLO75368 114 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 RPL17P18621 184 aaKnown RBP15.82■□□□□ 0.12
SDC4-201ENST00000372733 CASP9P55211 416 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 COPZ1P61923 177 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 TP53BP2Q13625 1128 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 CDKN3Q16667 212 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 VRK3Q8IV63 474 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 L3MBTL4Q8NA19 623 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 BBS2Q9BXC9 721 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 ATG10Q9H0Y0 220 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 NMRK2Q9NPI5 230 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 FZD4Q9ULV1 537 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 PCDHGB3Q9Y5G1 929 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 A3GALT2U3KPV4 340 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 C2orf78A6NCI8 922 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 TNFRSF11BO00300 401 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 SLC6A12P48065 614 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 SLC11A1P49279 550 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 B4GALNT1Q00973 533 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 BCL2L1Q07817 233 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 GAB1Q13480 694 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 FAM26DQ5JW98 314 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 RSBN1Q5VWQ0 802 aaPredicted RBP15.82■□□□□ 0.12
SDC4-201ENST00000372733 TPGS1Q6ZTW0 290 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 STX19Q8N4C7 294 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 CPA6Q8N4T0 437 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 OR10G2Q8NGC3 310 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 UTP15Q8TED0 518 aaKnown RBP15.82■□□□□ 0.12
SDC4-201ENST00000372733 NEK6Q9HC98 313 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 PLCXD1Q9NUJ7 323 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 FBXL12Q9NXK8 326 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 ZNF226Q9NYT6 803 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 SPATA7Q9P0W8 599 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 SLC6A14Q9UN76 642 aa15.82■□□□□ 0.12
SDC4-201ENST00000372733 CELF2O95319 508 aaKnown RBP15.81■□□□□ 0.12
SDC4-201ENST00000372733 MED26O95402 600 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 ACPPP15309 386 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 RGS6P49758 472 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 UGT2B15P54855 530 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 SRSF11Q05519 484 aaKnown RBP15.81■□□□□ 0.12
SDC4-201ENST00000372733 ABRQ12979 859 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 CHIT1Q13231 466 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 PPIGQ13427 754 aaKnown RBP eCLIP15.81■□□□□ 0.12
SDC4-201ENST00000372733 LYPLAL1Q5VWZ2 237 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 RFLNAQ6ZTI6 216 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 CCDC80Q76M96 950 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 MTERF1Q99551 399 aaKnown RBP15.81■□□□□ 0.12
SDC4-201ENST00000372733 MARCH7Q9H992 704 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 RMI1Q9H9A7 625 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 C14orf119Q9NWQ9 140 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 FAM120CQ9NX05 1096 aaKnown RBP15.81■□□□□ 0.12
SDC4-201ENST00000372733 NDUFAF4Q9P032 175 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 PCDHB11Q9Y5F2 797 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 A0A1W2PQ67 120 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 NPIPB15A6NHN6 443 aaPredicted RBP15.81■□□□□ 0.12
SDC4-201ENST00000372733 ST3GAL4Q11206 333 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 VEZF1Q14119 521 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 RGMBQ6NW40 437 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 C17orf99Q6UX52 265 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 CYP4Z2PQ8N1L4 340 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 UPF1Q92900 1129 aaKnown RBP eCLIP15.81■□□□□ 0.126e-17■■■■■ 85.8
SDC4-201ENST00000372733 NIPSNAP1Q9BPW8 284 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 CHST8Q9H2A9 424 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 ADPRHL2Q9NX46 363 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 RAPGEFL1Q9UHV5 662 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 PCDHGA2Q9Y5H1 932 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 OR51B4Q9Y5P0 310 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 NOX1Q9Y5S8 564 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 GCM2O75603 506 aaPredicted RBP15.81■□□□□ 0.12
SDC4-201ENST00000372733 CCNKO75909 580 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 ADRA2AP08913 450 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 CKBP12277 381 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 CD22P20273 847 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 NSG1P42857 185 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 OR1E2P47887 323 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 FOXD4Q12950 439 aaPredicted RBP15.81■□□□□ 0.12
SDC4-201ENST00000372733 C10orf62Q5T681 223 aaPredicted RBP15.81■□□□□ 0.12
SDC4-201ENST00000372733 LRRC66Q68CR7 880 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 APCDD1Q8J025 514 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 FCRL1Q96LA6 429 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 COL21A1Q96P44 957 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 P2RY13Q9BPV8 354 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 EMILIN2Q9BXX0 1053 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 DNAJC11Q9NVH1 559 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 EHD3Q9NZN3 535 aa15.81■□□□□ 0.12
SDC4-201ENST00000372733 SNX8Q9Y5X2 465 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms