RNA–Protein interactions for RNA: ENST00000372317.7

CALCOCO2-202, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 462 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-202ENST00000372317 ARID1BQ8NFD5 2236 aaPredicted RBP11.04□□□□□ -0.64
CALCOCO2-202ENST00000372317 SLC9B1P1A6NJY1 282 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 MAGEB17A8MXT2 336 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 CBFA2T3O75081 653 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 RASSF9O75901 435 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 C9P02748 559 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 CKMT2P17540 419 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 SERPINB1P30740 379 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 MLLT3P42568 568 aaPredicted RBP11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 ACADVLP49748 655 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 RPS13P62277 151 aaKnown RBP11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 PHEXP78562 749 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 GABPB1Q06547 395 aaPredicted RBP11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 CSTF3Q12996 717 aaKnown RBP11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 TUBB3Q13509 450 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 NR6A1Q15406 480 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 IMPG1Q17R60 797 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 DEFB110Q30KQ9 67 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 SNAP47Q5SQN1 464 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 C10orf62Q5T681 223 aaPredicted RBP11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 STPG1Q5TH74 334 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 NXNQ6DKJ4 435 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 WDR74Q6RFH5 385 aaPredicted RBP11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 ACAD11Q709F0 780 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 RNF44Q7L0R7 432 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 ASCL5Q7RTU5 278 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 TMPRSS9Q7Z410 1059 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 ALYREFQ86V81 257 aaKnown RBP11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 TBC1D19Q8N5T2 526 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 MFSD9Q8NBP5 474 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 STON2Q8WXE9 905 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 TUBGCP3Q96CW5 907 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 SEC16BQ96JE7 1060 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 MAELQ96JY0 434 aaKnown RBP11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 FCRL4Q96PJ5 515 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 TRAPPC9Q96Q05 1148 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 LRRN3Q9H3W5 708 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 NT5DC2Q9H857 520 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 TCF7L2Q9NQB0 619 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 C1GALT1Q9NS00 363 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 RIC8BQ9NVN3 520 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 SOHLH2Q9NX45 425 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 SLC12A4Q9UP95 1085 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 TSC22D4Q9Y3Q8 395 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 PCDHGA4Q9Y5G9 962 aa11.03□□□□□ -0.64
CALCOCO2-202ENST00000372317 IGHV5-51A0A0C4DH38 117 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 A0A0J9YVX5 310 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 D6RAR5 112 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 E9PBE3 544 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 SLC28A1O00337 649 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 RGS14O43566 566 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 LCMT2O60294 686 aaKnown RBP11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 FOXD2O60548 495 aaPredicted RBP11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 KLHL41O60662 606 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 SH3BGRLO75368 114 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 RSL1D1O76021 490 aaKnown RBP11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 ETHE1O95571 254 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 CPNE6O95741 557 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 SERPIND1P05546 499 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 PRR35P0CG20 571 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 ACP1P24666 158 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 PIK3CBP42338 1070 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 RPS15AP62244 130 aaKnown RBP11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 NHLH1Q02575 133 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 TERF2Q15554 542 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 LSM12Q3MHD2 195 aaKnown RBP11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 GALNTL6Q49A17 601 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 CACHD1Q5VU97 1274 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 TRIM46Q7Z4K8 759 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 PRSS42Q7Z5A4 293 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 VN1R4Q7Z5H5 301 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 CACNA2D3Q8IZS8 1091 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 CCDC197Q8NCU1 140 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 ACTRT2Q8TDY3 377 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 MARK4Q96L34 752 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 RILPQ96NA2 401 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 CCT7Q99832 543 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 ZFYVE21Q9BQ24 234 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 SARGQ9BW04 601 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 MS4A8Q9BY19 250 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 RHBGQ9H310 441 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 AKTIPQ9H8T0 292 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 FAM60AQ9NP50 221 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 PFDN4Q9NQP4 134 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 PILRAQ9UKJ1 303 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 APOBEC2Q9Y235 224 aaKnown RBP11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 ARL2BPQ9Y2Y0 163 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 CCL27Q9Y4X3 112 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 VPS13AQ96RL7 3174 aa11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 SNRNP200O75643 2136 aaKnown RBP11.02□□□□□ -0.65
CALCOCO2-202ENST00000372317 RALGAPA1Q6GYQ0 2036 aa11.01□□□□□ -0.65
CALCOCO2-202ENST00000372317 ANKDD1BA6NHY2 528 aa11.01□□□□□ -0.65
CALCOCO2-202ENST00000372317 FOXE1O00358 373 aaPredicted RBP11.01□□□□□ -0.65
CALCOCO2-202ENST00000372317 LSM1O15116 133 aaKnown RBP11.01□□□□□ -0.65
CALCOCO2-202ENST00000372317 P2RX6O15547 441 aa11.01□□□□□ -0.65
CALCOCO2-202ENST00000372317 NDUFS4O43181 175 aa11.01□□□□□ -0.65
CALCOCO2-202ENST00000372317 VPS4BO75351 444 aa11.01□□□□□ -0.65
CALCOCO2-202ENST00000372317 TBX6O95947 436 aaPredicted RBP11.01□□□□□ -0.65
CALCOCO2-202ENST00000372317 GP1BAP07359 652 aa11.01□□□□□ -0.65
CALCOCO2-202ENST00000372317 THRAP10827 490 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms