RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 JPH3Q8WXH2 748 aaPredicted RBP14.28□□□□□ -0.12
NDC1-201ENST00000371429 LRRC58Q96CX6 371 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 TMEM138Q9NPI0 162 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 FANCFQ9NPI8 374 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 MS4A12Q9NXJ0 267 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 G6PDP11413 515 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 CRB2Q5IJ48 1285 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 PACS2Q86VP3 889 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 EPYCQ99645 322 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 PRTFDC1Q9NRG1 225 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 FAM120CQ9NX05 1096 aaKnown RBP14.28□□□□□ -0.12
NDC1-201ENST00000371429 HCN2Q9UL51 889 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 OR1A2Q9Y585 309 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 AK5Q9Y6K8 562 aa14.28□□□□□ -0.12
NDC1-201ENST00000371429 KHDRBS3O75525 346 aaKnown RBP14.27□□□□□ -0.12
NDC1-201ENST00000371429 PGRP06401 933 aa14.27□□□□□ -0.12
NDC1-201ENST00000371429 MPC1LP0DKB6 136 aa14.27□□□□□ -0.12
NDC1-201ENST00000371429 C1GALT1C1LP0DN25 315 aa14.27□□□□□ -0.12
NDC1-201ENST00000371429 ARSAP15289 507 aa14.27□□□□□ -0.12
NDC1-201ENST00000371429 PSMA1P25786 263 aaKnown RBP14.27□□□□□ -0.12
NDC1-201ENST00000371429 SPINT3P49223 89 aa14.27□□□□□ -0.12
NDC1-201ENST00000371429 ZNF763Q0D2J5 394 aa14.27□□□□□ -0.12
NDC1-201ENST00000371429 NIPAL4Q0D2K0 466 aa14.27□□□□□ -0.12
NDC1-201ENST00000371429 LASP1Q14847 261 aaKnown RBP14.27□□□□□ -0.12
NDC1-201ENST00000371429 GFOD2Q3B7J2 385 aa14.27□□□□□ -0.12
NDC1-201ENST00000371429 C10orf62Q5T681 223 aaPredicted RBP14.27□□□□□ -0.12
NDC1-201ENST00000371429 LIN54Q6MZP7 749 aa14.27□□□□□ -0.12
NDC1-201ENST00000371429 PSAPL1Q6NUJ1 521 aa14.27□□□□□ -0.12
NDC1-201ENST00000371429 ASPGQ86U10 573 aa14.27□□□□□ -0.12
NDC1-201ENST00000371429 OR10H4Q8NGA5 316 aa14.27□□□□□ -0.12
NDC1-201ENST00000371429 OR4K14Q8NGD5 310 aa14.27□□□□□ -0.12
NDC1-201ENST00000371429 CLSTN3Q9BQT9 956 aa14.27□□□□□ -0.12
NDC1-201ENST00000371429 ACTL8Q9H568 366 aa14.27□□□□□ -0.12
NDC1-201ENST00000371429 DNAJB9Q9UBS3 223 aa14.27□□□□□ -0.12
NDC1-201ENST00000371429 MYH13Q9UKX3 1938 aa14.27□□□□□ -0.12
NDC1-201ENST00000371429 PRSS51A0A1B0GVH4 220 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 SLC16A5O15375 505 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 RSL1D1O76021 490 aaKnown RBP14.27□□□□□ -0.13
NDC1-201ENST00000371429 CYB5AP00167 134 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 PDSS1Q5T2R2 415 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 AMIGO1Q86WK6 493 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 NPWQ8N729 165 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 MTG2Q9H4K7 406 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 FTSJ1Q9UET6 329 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 GPC6Q9Y625 555 aaPredicted RBP14.27□□□□□ -0.13
NDC1-201ENST00000371429 UBE2QL1A1L167 161 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 LINGO3P0C6S8 592 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 AGTR2P50052 363 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 SLC18A2Q05940 514 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 HERC3Q15034 1050 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 ADGRD2Q7Z7M1 963 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 RPLP0P6Q8NHW5 317 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 SCRN2Q96FV2 425 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 PLEKHG4BQ96PX9 1271 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 KCNA7Q96RP8 456 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 PTGES2Q9H7Z7 377 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 POMPQ9Y244 141 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 AKAP8O43823 692 aaKnown RBP14.27□□□□□ -0.13
NDC1-201ENST00000371429 ANXA8P13928 327 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 ABATP80404 500 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 KLHDC10Q6PID8 442 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 NPAS3Q8IXF0 933 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 DPH7Q9BTV6 452 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 TPT1P8Q9HAU6 139 aa14.27□□□□□ -0.13
NDC1-201ENST00000371429 FAM170BA6NMN3 283 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 M0QX08 132 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 IDH3BO43837 385 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 MTHFD1P11586 935 aaKnown RBP14.26□□□□□ -0.13
NDC1-201ENST00000371429 UFM1P61960 85 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 TRAP1Q12931 704 aaKnown RBP14.26□□□□□ -0.13
NDC1-201ENST00000371429 ZNF678Q5SXM1 525 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 IL17FQ96PD4 163 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 SMURF2Q9HAU4 748 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 MCUBQ9NWR8 336 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 ATXN10Q9UBB4 475 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 TNFRSF10BO14763 440 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 SNPHO15079 494 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 SDC3O75056 442 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 CDC123O75794 336 aaPredicted RBP14.26□□□□□ -0.13
NDC1-201ENST00000371429 ITGBL1O95965 494 aaPredicted RBP14.26□□□□□ -0.13
NDC1-201ENST00000371429 CD2P06729 351 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 RABIFP47224 123 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 AFF1P51825 1210 aaKnown RBP14.26□□□□□ -0.13
NDC1-201ENST00000371429 ITGADQ13349 1161 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 SPANXN4Q5MJ08 99 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 GHDCQ8N2G8 530 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 DENND2DQ9H6A0 471 aaPredicted RBP14.26□□□□□ -0.13
NDC1-201ENST00000371429 RNF121Q9H920 327 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 TAS2R1Q9NYW7 299 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 TRBC2A0A5B9 178 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 TPD52L2O43399 206 aaKnown RBP14.26□□□□□ -0.13
NDC1-201ENST00000371429 OR2B3O76000 313 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 HNRNPA2B1P22626 353 aaKnown RBP14.26□□□□□ -0.13
NDC1-201ENST00000371429 SLC18A1P54219 525 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 PER3P56645 1201 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 PPP3R1P63098 170 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 EMX2Q04743 252 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 DEFB134Q4QY38 66 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 RAB6CQ53S08 254 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 GPR153Q6NV75 609 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms