RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 TIA1P31483 386 aaKnown RBP eCLIP27.89■■■□□ 2.068e-7■■■■■ 30.6
SSBP3-204ENST00000371320 VIPR2P41587 438 aa27.89■■■□□ 2.06
SSBP3-204ENST00000371320 UBE3AQ05086 875 aa27.89■■■□□ 2.06
SSBP3-204ENST00000371320 ELP6Q0PNE2 266 aa27.89■■■□□ 2.06
SSBP3-204ENST00000371320 CAMK1Q14012 370 aa27.89■■■□□ 2.06
SSBP3-204ENST00000371320 C16orf72Q14CZ0 275 aa27.89■■■□□ 2.06
SSBP3-204ENST00000371320 CATSPEREQ5SY80 951 aa27.89■■■□□ 2.06
SSBP3-204ENST00000371320 EIF3MQ7L2H7 374 aaKnown RBP27.89■■■□□ 2.06
SSBP3-204ENST00000371320 CAMKMTQ7Z624 323 aa27.89■■■□□ 2.06
SSBP3-204ENST00000371320 VTCN1Q7Z7D3 282 aa27.89■■■□□ 2.06
SSBP3-204ENST00000371320 hCG_2039718K7EN88 272 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 PCDH7O60245 1069 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 NPPBP16860 134 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 IDSP22304 550 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 ISL1P61371 349 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 GRSF1Q12849 480 aaKnown RBP eCLIP27.88■■■□□ 2.05
SSBP3-204ENST00000371320 TOP3AQ13472 1001 aaPredicted RBP27.88■■■□□ 2.05
SSBP3-204ENST00000371320 STARD3Q14849 445 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 DHRS4L2Q6PKH6 230 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 CBLL1Q75N03 491 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 SPRED2Q7Z698 418 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 NPAS3Q8IXF0 933 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 SYNPOQ8N3V7 929 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 TMIEQ8NEW7 156 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 OR8D1Q8WZ84 308 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 SGCDQ92629 289 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 BADQ92934 168 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 COQ8BQ96D53 544 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 NRBF2Q96F24 287 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 NAA50Q9GZZ1 169 aaKnown RBP27.88■■■□□ 2.05
SSBP3-204ENST00000371320 GABARAPL1Q9H0R8 117 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 FZD4Q9ULV1 537 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 LAMA3Q16787 3333 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 NOL3O60936 208 aaKnown RBP27.88■■■□□ 2.05
SSBP3-204ENST00000371320 FKBP9O95302 570 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 SEMG1P04279 462 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 GABARAPL2P60520 117 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 IL18R1Q13478 541 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 VEZF1Q14119 521 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 C9orf64Q5T6V5 341 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 XAF1Q6GPH4 301 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 CEP68Q76N32 757 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 HSH2DQ96JZ2 352 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 SAMD11Q96NU1 681 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 BARD1Q99728 777 aaKnown RBP27.88■■■□□ 2.05
SSBP3-204ENST00000371320 SPATA9Q9BWV2 254 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 ASPSCR1Q9BZE9 553 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 TMEM9Q9P0T7 183 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 SH3BP4Q9P0V3 963 aa27.88■■■□□ 2.05
SSBP3-204ENST00000371320 BCKDKO14874 412 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 MITFO75030 526 aaPredicted RBP27.87■■■□□ 2.05
SSBP3-204ENST00000371320 ITGAMP11215 1152 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 PPIBP23284 216 aaKnown RBP27.87■■■□□ 2.05
SSBP3-204ENST00000371320 GSTM2P28161 218 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 SLC6A11P48066 632 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 FPGSQ05932 587 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 SLBPQ14493 270 aaKnown RBP eCLIP27.87■■■□□ 2.05
SSBP3-204ENST00000371320 TMEM240Q5SV17 173 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 ZNF765Q7L2R6 523 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 TRMT11Q7Z4G4 463 aaKnown RBP27.87■■■□□ 2.05
SSBP3-204ENST00000371320 GALNT5Q7Z7M9 940 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 SPARTQ8N0X7 666 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 OR9A1PQ8NGU1 263 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 CORO2BQ9UQ03 480 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 NUP214P35658 2090 aaPredicted RBP27.87■■■□□ 2.05
SSBP3-204ENST00000371320 PLK4O00444 970 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 LZTS3O60299 673 aaPredicted RBP27.87■■■□□ 2.05
SSBP3-204ENST00000371320 MMP20O60882 483 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 C6P13671 934 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 RYKP34925 604 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 CCR3P51677 355 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 VLDLRP98155 873 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 LAPTM4AQ15012 233 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 HNRNPA1L2Q32P51 320 aaKnown RBP27.87■■■□□ 2.05
SSBP3-204ENST00000371320 ARHGAP22Q7Z5H3 698 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 CYP4Z1Q86W10 505 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 HORMAD1Q86X24 394 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 ETFBKMTQ8IXQ9 262 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 PIK3C3Q8NEB9 887 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 EFCAB11Q9BUY7 163 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 SH2B3Q9UQQ2 575 aa27.87■■■□□ 2.05
SSBP3-204ENST00000371320 EDDM13A0A1B0GTR0 161 aa27.86■■■□□ 2.05
SSBP3-204ENST00000371320 C1orf226A1L170 272 aa27.86■■■□□ 2.05
SSBP3-204ENST00000371320 SEC14L2O76054 403 aa27.86■■■□□ 2.05
SSBP3-204ENST00000371320 DIRAS1O95057 198 aa27.86■■■□□ 2.05
SSBP3-204ENST00000371320 C1GALT1C1LP0DN25 315 aa27.86■■■□□ 2.05
SSBP3-204ENST00000371320 AGXTP21549 392 aa27.86■■■□□ 2.05
SSBP3-204ENST00000371320 MATN1P21941 496 aa27.86■■■□□ 2.05
SSBP3-204ENST00000371320 DNAJA1P31689 397 aaKnown RBP27.86■■■□□ 2.05
SSBP3-204ENST00000371320 TUBA3CQ13748 450 aa27.86■■■□□ 2.05
SSBP3-204ENST00000371320 LAIR2Q6ISS4 152 aa27.86■■■□□ 2.05
SSBP3-204ENST00000371320 GALNT18Q6P9A2 607 aa27.86■■■□□ 2.05
SSBP3-204ENST00000371320 CPA6Q8N4T0 437 aa27.86■■■□□ 2.05
SSBP3-204ENST00000371320 LMNTD1Q8N9Z9 388 aa27.86■■■□□ 2.05
SSBP3-204ENST00000371320 SGPP1Q9BX95 441 aa27.86■■■□□ 2.05
SSBP3-204ENST00000371320 TRIM39Q9HCM9 518 aa27.86■■■□□ 2.05
SSBP3-204ENST00000371320 VPS4AQ9UN37 437 aa27.86■■■□□ 2.05
SSBP3-204ENST00000371320 PAGE2BQ5JRK9 111 aa27.85■■■□□ 2.05
SSBP3-204ENST00000371320 OR4A15Q8NGL6 344 aa27.85■■■□□ 2.05
SSBP3-204ENST00000371320 ZFP90Q8TF47 636 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms