RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 CNOT10Q9H9A5 744 aaKnown RBP14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 TXLNGQ9NUQ3 528 aa14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 DNAJC11Q9NVH1 559 aa14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 CPSF2Q9P2I0 782 aaKnown RBP14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 KCNE2Q9Y6J6 123 aa14.39□□□□□ -0.11
SMPDL3A-201ENST00000368440 PTPRQQ9UMZ3 2332 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 HYKKA2RU49 373 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 SYCE1LA8MT33 242 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 K7ENP7 123 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 IPO13O94829 963 aaKnown RBP14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 KLK3P07288 261 aaPredicted RBP14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 SBK3P0C264 359 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 PYGBP11216 843 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 ALAS2P22557 587 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 UCNP55089 124 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 RPS15AP62244 130 aaKnown RBP14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 RPS18P62269 152 aaKnown RBP14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 NFKB2Q00653 900 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 PFKFB4Q16877 469 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 TSNAXIP1Q2TAA8 658 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 FAM69BQ5VUD6 431 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 INO80CQ6PI98 192 aaPredicted RBP14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 ARHGEF39Q8N4T4 335 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 SNX31Q8N9S9 440 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 KIAA1143Q96AT1 154 aaPredicted RBP14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 CABS1Q96KC9 395 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 PRORYQ9H606 182 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 PELI2Q9HAT8 420 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 NDOR1Q9UHB4 597 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 DSCR3O14972 297 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 KLK8O60259 260 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 GFAPP14136 432 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 ARSFP54793 590 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 CYP4F2P78329 520 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 REEP5Q00765 189 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 VAC14Q08AM6 782 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 SETDB1Q15047 1291 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 C16orf46Q6P387 395 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 SLCO4C1Q6ZQN7 724 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 TMEM151BQ8IW70 566 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 TMEM151AQ8N4L1 468 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 PROKR1Q8TCW9 393 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 RERGQ96A58 199 aaPredicted RBP14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 SLC22A11Q9NSA0 550 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 TMEM216Q9P0N5 145 aa14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 MRPS2Q9Y399 296 aaKnown RBP14.38□□□□□ -0.11
SMPDL3A-201ENST00000368440 CCDC88CQ9P219 2028 aa14.37□□□□□ -0.11
SMPDL3A-201ENST00000368440 MGAQ8IWI9 3026 aa14.37□□□□□ -0.11
SMPDL3A-201ENST00000368440 KCNE1BA0A087WTH5 132 aa14.37□□□□□ -0.11
SMPDL3A-201ENST00000368440 A0A1B0GX78 115 aa14.37□□□□□ -0.11
SMPDL3A-201ENST00000368440 TRBC2A0A5B9 178 aa14.37□□□□□ -0.11
SMPDL3A-201ENST00000368440 CCDC189A1A4V9 331 aa14.37□□□□□ -0.11
SMPDL3A-201ENST00000368440 OR1F1O43749 312 aa14.37□□□□□ -0.11
SMPDL3A-201ENST00000368440 KATNA1O75449 491 aa14.37□□□□□ -0.11
SMPDL3A-201ENST00000368440 SIX3O95343 332 aaPredicted RBP14.37□□□□□ -0.11
SMPDL3A-201ENST00000368440 RBP1P09455 135 aa14.37□□□□□ -0.11
SMPDL3A-201ENST00000368440 GNAZP19086 355 aa14.37□□□□□ -0.11
SMPDL3A-201ENST00000368440 FOXL2P58012 376 aa14.37□□□□□ -0.11
SMPDL3A-201ENST00000368440 MAGOHP61326 146 aaKnown RBP14.37□□□□□ -0.11
SMPDL3A-201ENST00000368440 PDK4Q16654 411 aa14.37□□□□□ -0.11
SMPDL3A-201ENST00000368440 SH2D5Q6ZV89 423 aa14.37□□□□□ -0.11
SMPDL3A-201ENST00000368440 LRRC70Q7Z2Q7 622 aa14.37□□□□□ -0.11
SMPDL3A-201ENST00000368440 ANKRD53Q8N9V6 530 aa14.37□□□□□ -0.11
SMPDL3A-201ENST00000368440 MFSD9Q8NBP5 474 aa14.37□□□□□ -0.11
SMPDL3A-201ENST00000368440 STARD8Q92502 1023 aa14.37□□□□□ -0.11
SMPDL3A-201ENST00000368440 TM4SF19Q96DZ7 209 aa14.37□□□□□ -0.11
SMPDL3A-201ENST00000368440 MOCOSQ96EN8 888 aa14.37□□□□□ -0.11
SMPDL3A-201ENST00000368440 SLC45A3Q96JT2 553 aa14.37□□□□□ -0.11
SMPDL3A-201ENST00000368440 SARGQ9BW04 601 aa14.37□□□□□ -0.11
SMPDL3A-201ENST00000368440 PPCSQ9HAB8 311 aa14.37□□□□□ -0.11
SMPDL3A-201ENST00000368440 HMGB1P1B2RPK0 211 aaPredicted RBP14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 RRP9O43818 475 aaKnown RBP14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 CNOT3O75175 753 aaKnown RBP14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 CDH16O75309 829 aa14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 C1GALT1C1LP0DN25 315 aa14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 KRT15P19012 456 aa14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 CD22P20273 847 aa14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 GRK3P35626 688 aa14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 OR1D4P47884 311 aa14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 ALDH18A1P54886 795 aaKnown RBP14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 DCDP81605 110 aaKnown RBP14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 RASA2Q15283 850 aa14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 ATP1A1-AS1Q5TC04 95 aa14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 YOD1Q5VVQ6 348 aaPredicted RBP14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 ATG9BQ674R7 924 aa14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 COX15Q7KZN9 410 aa14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 PTGR2Q8N8N7 351 aaPredicted RBP14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 ENDOVQ8N8Q3 282 aaKnown RBP14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 FAM76AQ8TAV0 307 aa14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 ACMSDQ8TDX5 336 aa14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 ROPN1BQ9BZX4 212 aaPredicted RBP14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 MRPL46Q9H2W6 279 aaKnown RBP14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 ACTL8Q9H568 366 aa14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 ROPN1Q9HAT0 212 aaPredicted RBP14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 GEMIN8Q9NWZ8 242 aaKnown RBP14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 GPRC5BQ9NZH0 403 aa14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 OPTCQ9UBM4 332 aa14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 PCDHGA6Q9Y5G7 932 aa14.36□□□□□ -0.11
SMPDL3A-201ENST00000368440 MAU2Q9Y6X3 613 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms