RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 TBC1D19Q8N5T2 526 aa9.38□□□□□ -0.91
CD48-202ENST00000368046 TMEM102Q8N9M5 508 aaPredicted RBP9.38□□□□□ -0.91
CD48-202ENST00000368046 CAMKVQ8NCB2 501 aa9.38□□□□□ -0.91
CD48-202ENST00000368046 SLC13A3Q8WWT9 602 aa9.38□□□□□ -0.91
CD48-202ENST00000368046 SLC5A11Q8WWX8 675 aa9.38□□□□□ -0.91
CD48-202ENST00000368046 NEIL2Q969S2 332 aa9.38□□□□□ -0.91
CD48-202ENST00000368046 KIAA1191Q96A73 305 aa9.38□□□□□ -0.91
CD48-202ENST00000368046 UNKQ9C0B0 810 aaKnown RBP9.38□□□□□ -0.91
CD48-202ENST00000368046 NMRAL1Q9HBL8 299 aa9.38□□□□□ -0.91
CD48-202ENST00000368046 ACSS2Q9NR19 701 aa9.38□□□□□ -0.91
CD48-202ENST00000368046 ZNF282Q9UDV7 671 aaPredicted RBP9.38□□□□□ -0.91
CD48-202ENST00000368046 TLK1Q9UKI8 766 aa9.38□□□□□ -0.91
CD48-202ENST00000368046 NXT1Q9UKK6 140 aaKnown RBP9.38□□□□□ -0.91
CD48-202ENST00000368046 NFU1Q9UMS0 254 aa9.38□□□□□ -0.91
CD48-202ENST00000368046 SH2B3Q9UQQ2 575 aa9.38□□□□□ -0.91
CD48-202ENST00000368046 DYRK1BQ9Y463 629 aa9.38□□□□□ -0.91
CD48-202ENST00000368046 MAU2Q9Y6X3 613 aa9.38□□□□□ -0.91
CD48-202ENST00000368046 ATMQ13315 3056 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 SMG1Q96Q15 3661 aaKnown RBP9.37□□□□□ -0.91
CD48-202ENST00000368046 IGLV3-12A0A075B6K2 115 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 TRBC2A0A5B9 178 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 CCDC189A1A4V9 331 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 HMX2A2RU54 273 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 ARGFXA6NJG6 315 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 PEX12O00623 359 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 TAPBPO15533 448 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 PRPF4O43172 522 aaKnown RBP eCLIP9.37□□□□□ -0.91
CD48-202ENST00000368046 FOXS1O43638 330 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 OR1F1O43749 312 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 H2AFYO75367 372 aaKnown RBP9.37□□□□□ -0.91
CD48-202ENST00000368046 RFPL1O75677 317 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 ACSL3O95573 720 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 C2P06681 752 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 UMODP07911 640 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 LTA4HP09960 611 aaKnown RBP9.37□□□□□ -0.91
CD48-202ENST00000368046 RHOXF2BP0C7M4 288 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 SLC35E2BP0CK96 405 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 GNAZP19086 355 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 CXCR2P25025 360 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 TYK2P29597 1187 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 OTX2P32243 289 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 BCL6P41182 706 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 GDF5P43026 501 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 AVPR1BP47901 424 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 SLC6A12P48065 614 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 CSRP3P50461 194 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 RRADP55042 308 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 OCA2Q04671 838 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 PWP1Q13610 501 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 EFTUD2Q15029 972 aaKnown RBP eCLIP9.37□□□□□ -0.91
CD48-202ENST00000368046 OR4D1Q15615 310 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 UAP1Q16222 522 aaPredicted RBP9.37□□□□□ -0.91
CD48-202ENST00000368046 FAM83EQ2M2I3 478 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 SULT1C3Q6IMI6 304 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 TCTN3Q6NUS6 607 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 BLOC1S3Q6QNY0 202 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 NXPE4Q6UWF7 544 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 CMC1Q7Z7K0 106 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 ZNF605Q86T29 641 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 ASPGQ86U10 573 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 DTWD1Q8N5C7 304 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 METTL27Q8N6F8 245 aaPredicted RBP9.37□□□□□ -0.91
CD48-202ENST00000368046 MFSD9Q8NBP5 474 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 C9orf43Q8TAL5 461 aaPredicted RBP9.37□□□□□ -0.91
CD48-202ENST00000368046 STT3BQ8TCJ2 826 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 SLC44A1Q8WWI5 657 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 MIEF2Q96C03 454 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 NXNL1Q96CM4 212 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 MMABQ96EY8 250 aaPredicted RBP9.37□□□□□ -0.91
CD48-202ENST00000368046 C10orf90Q96M02 699 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 FER1L6-AS2Q96M78 137 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 SPSB2Q99619 263 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 RHOXF2Q9BQY4 288 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 DRC3Q9H069 523 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 CNOT10Q9H9A5 744 aaKnown RBP9.37□□□□□ -0.91
CD48-202ENST00000368046 L2HGDHQ9H9P8 463 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 PELI2Q9HAT8 420 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 CD274Q9NZQ7 290 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 PTBP2Q9UKA9 531 aaKnown RBP9.37□□□□□ -0.91
CD48-202ENST00000368046 RNF112Q9ULX5 631 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 IKBKGQ9Y6K9 419 aa9.37□□□□□ -0.91
CD48-202ENST00000368046 A0A087WUV0 522 aaPredicted RBP9.36□□□□□ -0.91
CD48-202ENST00000368046 A0A087X1B8 175 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 NCF1BA6NI72 391 aaPredicted RBP9.36□□□□□ -0.91
CD48-202ENST00000368046 NCF1CA8MVU1 366 aaPredicted RBP9.36□□□□□ -0.91
CD48-202ENST00000368046 H0YIG0 161 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 P2RX6O15547 441 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 STK16O75716 305 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 IPO13O94829 963 aaKnown RBP9.36□□□□□ -0.91
CD48-202ENST00000368046 WDR47O94967 919 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 NSA2O95478 260 aaKnown RBP9.36□□□□□ -0.91
CD48-202ENST00000368046 INHBAP08476 426 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 ZGLP1P0C6A0 271 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 SLC35G6P0C7Q6 338 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 C1GALT1C1LP0DN25 315 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 NCF1P14598 390 aaPredicted RBP9.36□□□□□ -0.91
CD48-202ENST00000368046 TFEBP19484 476 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 FBLP22087 321 aaKnown RBP9.36□□□□□ -0.91
CD48-202ENST00000368046 MMP11P24347 488 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 AHRP35869 848 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms