RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 ZW10O43264 779 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 BNIP3LO60238 219 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 VNN2O95498 520 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 C9P02748 559 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 LAMP1P11279 417 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 COX7A2P14406 83 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 TUBA1BP68363 451 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 HSPA14Q0VDF9 509 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 NFATC2Q13469 925 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 SPANXN2Q5MJ10 180 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 TMC5Q6UXY8 1006 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 RFLNAQ6ZTI6 216 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 TUBA1AQ71U36 451 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 TSEN54Q7Z6J9 526 aaKnown RBP13.13□□□□□ -0.31
PRKN-205ENST00000366897 SYT12Q8IV01 421 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 VANGL1Q8TAA9 524 aaPredicted RBP13.13□□□□□ -0.31
PRKN-205ENST00000366897 FUBP3Q96I24 572 aaKnown RBP eCLIP13.13□□□□□ -0.31
PRKN-205ENST00000366897 CDK5RAP1Q96SZ6 601 aaKnown RBP13.13□□□□□ -0.31
PRKN-205ENST00000366897 TTYH2Q9BSA4 534 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 OLA1Q9NTK5 396 aaKnown RBP13.13□□□□□ -0.31
PRKN-205ENST00000366897 OGDHLQ9ULD0 1010 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 SLC22A14Q9Y267 594 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 LOC110117498-PIK3R3F6TDL0 507 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 J3KTA2 159 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 CDK1P06493 297 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 CD9P21926 228 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 RGS6P49758 472 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 CDH4P55283 916 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 ITGA1P56199 1179 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 DSC3Q14574 896 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 TSTQ16762 297 aaKnown RBP13.13□□□□□ -0.31
PRKN-205ENST00000366897 LRRC26Q2I0M4 334 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 IQCCQ4KMZ1 466 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 INO80DQ53TQ3 878 aaPredicted RBP13.13□□□□□ -0.31
PRKN-205ENST00000366897 AGAP6Q5VW22 663 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 NEK5Q6P3R8 708 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 GLB1LQ6UWU2 654 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 EIF3MQ7L2H7 374 aaKnown RBP13.13□□□□□ -0.31
PRKN-205ENST00000366897 TSPAN33Q86UF1 283 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 UBE2J2Q8N2K1 259 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 TRPV1Q8NER1 839 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 GTPBP3Q969Y2 492 aaKnown RBP13.13□□□□□ -0.31
PRKN-205ENST00000366897 C7orf34Q96L11 122 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 AGAP4Q96P64 663 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 PITX2Q99697 317 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 RERGLQ9H628 205 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 TBC1D14Q9P2M4 693 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 ZNF221Q9UK13 617 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 RPS6KA6Q9UK32 745 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 PCDHB1Q9Y5F3 818 aa13.13□□□□□ -0.31
PRKN-205ENST00000366897 MTMR11A4FU01 709 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 CLCA1A8K7I4 914 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 HOXC11O43248 304 aaPredicted RBP13.12□□□□□ -0.31
PRKN-205ENST00000366897 SEMG1P04279 462 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 IL1RNP18510 177 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 CORO1AP31146 461 aaKnown RBP13.12□□□□□ -0.31
PRKN-205ENST00000366897 HMGCLP35914 325 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 PIK3CBP42338 1070 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 GATMP50440 423 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 CDH12P55289 794 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 DAB2P98082 770 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 SMARCB1Q12824 385 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 TBCEQ15813 527 aaPredicted RBP13.12□□□□□ -0.31
PRKN-205ENST00000366897 DUOXA1Q1HG43 343 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 PTCHD3Q3KNS1 767 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 LRRC73Q5JTD7 316 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 GPRC6AQ5T6X5 926 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 NOXRED1Q6NXP6 359 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 NCEH1Q6PIU2 408 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 CBLL1Q75N03 491 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 RTN4RL1Q86UN2 441 aaPredicted RBP13.12□□□□□ -0.31
PRKN-205ENST00000366897 RBFAQ8N0V3 343 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 CARNMT1Q8N4J0 409 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 OR6F1Q8NGZ6 308 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 LILRB4Q8NHJ6 448 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 C17orf50Q8WW18 174 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 TPT1P8Q9HAU6 139 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 SPASTQ9UBP0 616 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 H7C0S8 307 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 PCDH7O60245 1069 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 CHRM5P08912 532 aaPredicted RBP13.12□□□□□ -0.31
PRKN-205ENST00000366897 CXCR2P25025 360 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 UGT2B10P36537 528 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 SLC11A2P49281 568 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 UGT2B15P54855 530 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 WNT3P56703 355 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 KCNJ10P78508 379 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 RING1Q06587 406 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 SERPINA11Q86U17 422 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 CEP19Q96LK0 163 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 COPS8Q99627 209 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 CCM2Q9BSQ5 444 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 MS4A12Q9NXJ0 267 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 ZNF226Q9NYT6 803 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 FZD4Q9ULV1 537 aa13.12□□□□□ -0.31
PRKN-205ENST00000366897 SMIM30A4D0T7 59 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 H3BQ06 376 aaPredicted RBP13.11□□□□□ -0.31
PRKN-205ENST00000366897 TNFRSF11BO00300 401 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 SMAD6O43541 496 aaKnown RBP13.11□□□□□ -0.31
PRKN-205ENST00000366897 APOA1P02647 267 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms