RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 HM13Q8TCT9 377 aa10.84□□□□□ -0.67
CSNK1E-202ENST00000366216 MCOLN3Q8TDD5 553 aa10.84□□□□□ -0.67
CSNK1E-202ENST00000366216 PTCD3Q96EY7 689 aaKnown RBP10.84□□□□□ -0.67
CSNK1E-202ENST00000366216 FOPNLQ96NB1 174 aa10.84□□□□□ -0.67
CSNK1E-202ENST00000366216 CCT7Q99832 543 aa10.84□□□□□ -0.67
CSNK1E-202ENST00000366216 TMEM79Q9BSE2 394 aa10.84□□□□□ -0.67
CSNK1E-202ENST00000366216 DPEP2Q9H4A9 486 aa10.84□□□□□ -0.67
CSNK1E-202ENST00000366216 WDR55Q9H6Y2 383 aaPredicted RBP10.84□□□□□ -0.67
CSNK1E-202ENST00000366216 GPN2Q9H9Y4 310 aaPredicted RBP10.84□□□□□ -0.67
CSNK1E-202ENST00000366216 SEMA4BQ9NPR2 832 aaPredicted RBP10.84□□□□□ -0.67
CSNK1E-202ENST00000366216 PFDN4Q9NQP4 134 aa10.84□□□□□ -0.67
CSNK1E-202ENST00000366216 PHPT1Q9NRX4 125 aaPredicted RBP10.84□□□□□ -0.67
CSNK1E-202ENST00000366216 ARL8BQ9NVJ2 186 aa10.84□□□□□ -0.67
CSNK1E-202ENST00000366216 WWOXQ9NZC7 414 aa10.84□□□□□ -0.67
CSNK1E-202ENST00000366216 ARMCX1Q9P291 453 aa10.84□□□□□ -0.67
CSNK1E-202ENST00000366216 ASB1Q9Y576 335 aa10.84□□□□□ -0.67
CSNK1E-202ENST00000366216 PCDHGA10Q9Y5H3 936 aa10.84□□□□□ -0.67
CSNK1E-202ENST00000366216 B3GALT1Q9Y5Z6 326 aa10.84□□□□□ -0.67
CSNK1E-202ENST00000366216 MDC1Q14676 2089 aaKnown RBP10.84□□□□□ -0.67
CSNK1E-202ENST00000366216 SVILO95425 2214 aa10.84□□□□□ -0.67
CSNK1E-202ENST00000366216 AKAP9Q99996 3911 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 GOLGA8QA0A0J9YX86 632 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 GOLGA8OA6NCC3 632 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 MGAT4DA6NG13 374 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 TMEM202A6NGA9 273 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 GOLGA8NF8WBI6 632 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 K7EPI3 171 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 PPP6CO00743 305 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 B4GAT1O43505 415 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 RAD1O60671 282 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 STK16O75716 305 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 POP7O75817 140 aaKnown RBP10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 RASGRP1O95267 797 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 CPNE6O95741 557 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 CLDN1O95832 211 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 GUCA1CO95843 209 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 OTCP00480 354 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 CATP04040 527 aaKnown RBP10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 JUNP05412 331 aaKnown RBP10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 HOXC4P09017 264 aaPredicted RBP10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 UROSP10746 265 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 HSPA7P48741 367 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 RPA4Q13156 261 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 RBBP7Q16576 425 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 CHSY3Q70JA7 882 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 LRRC70Q7Z2Q7 622 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 RD3Q7Z3Z2 195 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 C11orf96Q7Z7L8 435 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 SYVN1Q86TM6 617 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 TREML1Q86YW5 311 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 ZNF547Q8IVP9 402 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 PARP9Q8IXQ6 854 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 KLHDC8AQ8IYD2 350 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 RCBTB1Q8NDN9 531 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 TWIST2Q8WVJ9 160 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 SKA2Q8WVK7 121 aaPredicted RBP10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 ESAMQ96AP7 390 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 KIAA1143Q96AT1 154 aaPredicted RBP10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 FBXL8Q96CD0 374 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 KLHL29Q96CT2 875 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 C19orf60Q96EN9 201 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 NTMT1Q9BV86 223 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 DDA1Q9BW61 102 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 LRMDAQ9H2I8 198 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 ZNF385DQ9H6B1 395 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 WDR26Q9H7D7 661 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 NOL11Q9H8H0 719 aaKnown RBP10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 RMI1Q9H9A7 625 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 ARL15Q9NXU5 204 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 LRIT1Q9P2V4 623 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 OPTCQ9UBM4 332 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 TAGLN3Q9UI15 199 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 ZNF225Q9UK10 706 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 DNAJC15Q9Y5T4 150 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 ST14Q9Y5Y6 855 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 MTORP42345 2549 aa10.83□□□□□ -0.68
CSNK1E-202ENST00000366216 E9PBE3 544 aa10.82□□□□□ -0.68
CSNK1E-202ENST00000366216 OR7A17O14581 309 aa10.82□□□□□ -0.68
CSNK1E-202ENST00000366216 NUDT21O43809 227 aaKnown RBP10.82□□□□□ -0.68
CSNK1E-202ENST00000366216 KLHL41O60662 606 aa10.82□□□□□ -0.68
CSNK1E-202ENST00000366216 KATNA1O75449 491 aa10.82□□□□□ -0.68
CSNK1E-202ENST00000366216 SKAP2O75563 359 aaPredicted RBP10.82□□□□□ -0.68
CSNK1E-202ENST00000366216 CRCPO75575 148 aa10.82□□□□□ -0.68
CSNK1E-202ENST00000366216 CHEK2O96017 543 aa10.82□□□□□ -0.68
CSNK1E-202ENST00000366216 ENO1P06733 434 aaKnown RBP10.82□□□□□ -0.68
CSNK1E-202ENST00000366216 ESRRAP11474 423 aaPredicted RBP10.82□□□□□ -0.68
CSNK1E-202ENST00000366216 MYCLP1P12525 358 aaPredicted RBP10.82□□□□□ -0.68
CSNK1E-202ENST00000366216 NCF2P19878 526 aaPredicted RBP10.82□□□□□ -0.68
CSNK1E-202ENST00000366216 MAP4P27816 1152 aaKnown RBP10.82□□□□□ -0.68
CSNK1E-202ENST00000366216 PTPN4P29074 926 aa10.82□□□□□ -0.68
CSNK1E-202ENST00000366216 SLC6A12P48065 614 aa10.82□□□□□ -0.68
CSNK1E-202ENST00000366216 FOXA1P55317 472 aa10.82□□□□□ -0.68
CSNK1E-202ENST00000366216 IRX1P78414 480 aaPredicted RBP10.82□□□□□ -0.68
CSNK1E-202ENST00000366216 INPP5AQ14642 412 aa10.82□□□□□ -0.68
CSNK1E-202ENST00000366216 C18orf21Q32NC0 220 aaPredicted RBP10.82□□□□□ -0.68
CSNK1E-202ENST00000366216 C14orf28Q4W4Y0 310 aa10.82□□□□□ -0.68
CSNK1E-202ENST00000366216 FBXO48Q5FWF7 155 aa10.82□□□□□ -0.68
CSNK1E-202ENST00000366216 ATP1A1-AS1Q5TC04 95 aa10.82□□□□□ -0.68
CSNK1E-202ENST00000366216 C1QL3Q5VWW1 255 aa10.82□□□□□ -0.68
CSNK1E-202ENST00000366216 NXNQ6DKJ4 435 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms