RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 NT5MQ9NPB1 228 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 ZNF71Q9NQZ8 489 aaPredicted RBP5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 SACM1LQ9NTJ5 587 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 TTLL3Q9Y4R7 772 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 PCYT1BQ9Y5K3 369 aaPredicted RBP5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 DOPEY2Q9Y3R5 2298 aa5.09□□□□□ -1.59
RNU4-4P-201ENST00000364588 ZNF106Q9H2Y7 1883 aaKnown RBP5.09□□□□□ -1.6
RNU4-4P-201ENST00000364588 LOC101059948A0A1B0GTJ6 334 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 B4E171 279 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 PSMD11O00231 422 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 SNX2O60749 519 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 RASSF9O75901 435 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 ATP1A1P05023 1023 aaKnown RBP5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 CELA2AP08217 269 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 SKILP12757 684 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 PEX2P28328 305 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 TEAD1P28347 426 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 OAS2P29728 719 aaKnown RBP5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 GJC1P36383 396 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 TSPAN7P41732 249 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 CCR10P46092 362 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 FASLGP48023 281 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 HCAR3P49019 387 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 TUBA4AP68366 448 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 CDC20Q12834 499 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 NFATC2Q13469 925 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 PEX6Q13608 980 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 IHHQ14623 411 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 DPYSL2Q16555 572 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 STX1AQ16623 288 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 CLPPQ16740 277 aaPredicted RBP5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 DEFB109BQ30KR1 87 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 ATP1A1-AS1Q5TC04 95 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 PRAMEF17Q5VTA0 474 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 SLC9A4Q6AI14 798 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 PPP1R2P3Q6NXS1 205 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 TMEM71Q6P5X7 295 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 RBM43Q6ZSC3 357 aaKnown RBP5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 TIPARPQ7Z3E1 657 aaKnown RBP5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 ZNF571Q7Z3V5 609 aaPredicted RBP5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 KDELC2Q7Z4H8 507 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 GALNT13Q8IUC8 556 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 PSTKQ8IV42 348 aaKnown RBP5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 SFRP1Q8N474 314 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 BMPERQ8N8U9 685 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 C9orf43Q8TAL5 461 aaPredicted RBP5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 TMEM171Q8WVE6 324 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 PIH1D2Q8WWB5 315 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 NCSTNQ92542 709 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 KIAA1143Q96AT1 154 aaPredicted RBP5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 RTP4Q96DX8 246 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 SCRN2Q96FV2 425 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 APIPQ96GX9 242 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 SLC45A3Q96JT2 553 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 SNX18Q96RF0 628 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 MCCC1Q96RQ3 725 aaPredicted RBP5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 RIOK2Q9BVS4 552 aaKnown RBP5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 ADNPQ9H2P0 1102 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 APMAPQ9HDC9 416 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 ARFGAP3Q9NP61 516 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 ANO10Q9NW15 660 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 CPNE7Q9UBL6 633 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 TBC1D29Q9UFV1 150 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 PILRAQ9UKJ1 303 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 KCNK6Q9Y257 313 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 CHKBQ9Y259 395 aa5.08□□□□□ -1.6
RNU4-4P-201ENST00000364588 HECTD1Q9ULT8 2610 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 A0A0J9YYE9 177 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 MFSD11O43934 449 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 STK17BO94768 372 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 RASAL1O95294 804 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 CLDN7O95471 211 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 TRBC1P01850 177 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 CHRM5P08912 532 aaPredicted RBP5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 CD48P09326 243 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 GZMAP12544 262 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 ACP5P13686 325 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 ZNF30P17039 623 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 NR1D1P20393 614 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 ACVR2AP27037 513 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 SERPINB6P35237 376 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 PCK1P35558 622 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 SSR1P43307 286 aaKnown RBP5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 STC1P52823 247 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 CDH6P55285 790 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 GFERP55789 205 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 KLHL30Q0D2K2 578 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 KRT81Q14533 505 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 SRSF7Q16629 238 aaKnown RBP eCLIP5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 CYP1B1Q16678 543 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 BOLA3Q53S33 107 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 FAM182AQ5T1J6 154 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 IYDQ6PHW0 289 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 CEACAM20Q6UY09 585 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 ZNF782Q6ZMW2 699 aaPredicted RBP5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 ARHGAP22Q7Z5H3 698 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 NDUFAF2Q8N183 169 aa5.07□□□□□ -1.6
RNU4-4P-201ENST00000364588 TEX26Q8N6G2 289 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms