RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 C6orf47O95873 294 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 ZNF267Q14586 743 aaPredicted RBP18.01■□□□□ 0.47
CLIP2-202ENST00000361545 ZDHHC12Q96GR4 267 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 GAL3ST1Q99999 423 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 SPATA9Q9BWV2 254 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 TRIM8Q9BZR9 551 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 COQ10BQ9H8M1 238 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 RNF121Q9H920 327 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 NEUROD4Q9HD90 331 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 WASF2Q9Y6W5 498 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 MYH13Q9UKX3 1938 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 TRBC2A0A5B9 178 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 SLC30A4O14863 429 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 CDK6Q00534 326 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 ZNF678Q5SXM1 525 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 LCN1P1Q5VSP4 162 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 MTG2Q9H4K7 406 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 NKIRAS2Q9NYR9 191 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 PGRP06401 933 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 MXD1Q05195 221 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 DSC3Q14574 896 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 PUM1Q14671 1186 aaKnown RBP eCLIP18.01■□□□□ 0.47
CLIP2-202ENST00000361545 SWT1Q5T5J6 900 aaKnown RBP18.01■□□□□ 0.47
CLIP2-202ENST00000361545 USP53Q70EK8 1073 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 UTS2BQ765I0 119 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 LAPTM4BQ86VI4 370 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 OR10Q1Q8NGQ4 319 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 WDR60Q8WVS4 1066 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 OR1A2Q9Y585 309 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 PCDHB3Q9Y5E6 796 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 M0QX08 132 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 PRKD3O94806 890 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 HEXBP07686 556 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 PPP1R8Q12972 351 aaKnown RBP18.01■□□□□ 0.47
CLIP2-202ENST00000361545 PCLAFQ15004 111 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 NPWQ8N729 165 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 OMA1Q96E52 524 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 AMBNQ9NP70 447 aa18.01■□□□□ 0.47
CLIP2-202ENST00000361545 TCHHQ07283 1943 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 CPNE3O75131 537 aaKnown RBP18■□□□□ 0.47
CLIP2-202ENST00000361545 IFNA6P05013 189 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 PGGT1BP53609 377 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 EEFSECP57772 596 aaKnown RBP18■□□□□ 0.47
CLIP2-202ENST00000361545 PPP3R1P63098 170 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 OR4K1Q8NGD4 311 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 C8orf33Q9H7E9 229 aaPredicted RBP18■□□□□ 0.47
CLIP2-202ENST00000361545 C19orf25Q9UFG5 118 aaPredicted RBP18■□□□□ 0.47
CLIP2-202ENST00000361545 RAB26Q9ULW5 256 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 LOC110117498-PIK3R3F6TDL0 507 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 OR5K1Q8NHB7 308 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 SCN11AQ9UI33 1791 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 PIK3CBP42338 1070 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 CAMK1Q14012 370 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 IL18Q14116 193 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 TCEAL8Q8IYN2 117 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 CHST14Q8NCH0 376 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 FAM3CQ92520 227 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 KIAA1143Q96AT1 154 aaPredicted RBP18■□□□□ 0.47
CLIP2-202ENST00000361545 EBF2Q9HAK2 575 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 TPT1P8Q9HAU6 139 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 BRD7Q9NPI1 651 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 SDK1Q7Z5N4 2213 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 ARPC2O15144 300 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 DBIP07108 87 aaKnown RBP18■□□□□ 0.47
CLIP2-202ENST00000361545 ASGR2P07307 311 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 VLDLRP98155 873 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 SLC18A2Q05940 514 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 KIAA1161Q6NSJ0 714 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 DENND1AQ8TEH3 1009 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 COMMD4Q9H0A8 199 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 FBRSL1Q9HCM7 1045 aaKnown RBP18■□□□□ 0.47
CLIP2-202ENST00000361545 SDHAF3Q9NRP4 125 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 ZNF222Q9UK12 451 aa18■□□□□ 0.47
CLIP2-202ENST00000361545 RLN1P04808 185 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 FHP07954 510 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 NIPAL4Q0D2K0 466 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 LPAL2Q16609 132 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 LGI4Q8N135 537 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 NODALQ96S42 347 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 STRADBQ9C0K7 418 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 MAFFQ9ULX9 164 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 ACTL7AQ9Y615 435 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 MYOCOSA0A1B0GUC4 107 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 MUSKO15146 869 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 SDC3O75056 442 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 LATS1O95835 1130 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 DUSP3P51452 185 aaPredicted RBP17.99■□□□□ 0.47
CLIP2-202ENST00000361545 TAS1R1Q7RTX1 841 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 TSPAN33Q86UF1 283 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 NPAS3Q8IXF0 933 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 SLC39A11Q8N1S5 342 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 TMEM74Q96NL1 305 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 HIST1H2AAQ96QV6 131 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 ARHGAP9Q9BRR9 750 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 GINS4Q9BRT9 223 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 LDAHQ9H6V9 325 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 AHCYL1O43865 530 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 MAGP20916 626 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 FAM214AQ32MH5 1076 aa17.99■□□□□ 0.47
CLIP2-202ENST00000361545 CLIP4Q8N3C7 705 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms