RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 OR2T29Q8NH02 315 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 ZNF317Q96PQ6 595 aaPredicted RBP13.05□□□□□ -0.32
LDB3-202ENST00000361373 SPATA9Q9BWV2 254 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 SLC7A8Q9UHI5 535 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 TRBC2A0A5B9 178 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 ZNF726A6NNF4 738 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 SPINT3P49223 89 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 GSK3BP49841 420 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 TECRLQ5HYJ1 363 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 IGDCC3Q8IVU1 814 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 LRCH3Q96II8 777 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 TRNT1Q96Q11 434 aaKnown RBP13.05□□□□□ -0.32
LDB3-202ENST00000361373 KCNH6Q9H252 994 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 TMEM138Q9NPI0 162 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 ABCB10Q9NRK6 738 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 TTC34A8MYJ7 566 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 JUNP05412 331 aaKnown RBP13.05□□□□□ -0.32
LDB3-202ENST00000361373 TACSTD2P09758 323 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 ACVR2AP27037 513 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 RPA4Q13156 261 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 SYT16Q17RD7 645 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 C6orf52Q5T4I8 152 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 NRROSQ86YC3 692 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 FAM156AQ8NDB6 213 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 OR4K17Q8NGC6 315 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 PSMA8Q8TAA3 256 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 HIST1H2AAQ96QV6 131 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 TMLHEQ9NVH6 421 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 TVP23BQ9NYZ1 205 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 C5P01031 1676 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 ARHGEF33A8MVX0 844 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 WASH4PA8MWX3 477 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 H0YC42 278 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 IFNA6P05013 189 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 POLR2CP19387 275 aaPredicted RBP13.05□□□□□ -0.32
LDB3-202ENST00000361373 HOXC13P31276 330 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 BCAP31P51572 246 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 DGKQP52824 942 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 HNRNPKP61978 463 aaKnown RBP eCLIP13.05□□□□□ -0.32
LDB3-202ENST00000361373 RASGEF1BQ0VAM2 473 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 MARCH8Q5T0T0 291 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 LGI4Q8N135 537 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 KCT2Q8NC54 265 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 ADAMTS18Q8TE60 1221 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 CASD1Q96PB1 797 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 COQ7Q99807 217 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.05□□□□□ -0.32
LDB3-202ENST00000361373 TMEM5Q9Y2B1 443 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 TCHHQ07283 1943 aa13.05□□□□□ -0.32
LDB3-202ENST00000361373 SAGE2PA6NJ88 616 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 DUX1O43812 170 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 TYROBPO43914 113 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 PEX2P28328 305 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 PTPRCAPQ14761 206 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 NDUFA5Q16718 116 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 TMEM35AQ53FP2 167 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 KIAA0319Q5VV43 1072 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 PAMR1Q6UXH9 720 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 USP30Q70CQ3 517 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 P2RY8Q86VZ1 359 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 OR5P2Q8WZ92 322 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 ISG20Q96AZ6 181 aaKnown RBP13.04□□□□□ -0.32
LDB3-202ENST00000361373 MAPKAP1Q9BPZ7 522 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 MGME1Q9BQP7 344 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 SPATA6Q9NWH7 488 aaPredicted RBP13.04□□□□□ -0.32
LDB3-202ENST00000361373 PGAP2Q9UHJ9 254 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 MED31Q9Y3C7 131 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 CHRM1P11229 460 aaPredicted RBP13.04□□□□□ -0.32
LDB3-202ENST00000361373 C6P13671 934 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 ZNF33BQ06732 778 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 SGCBQ16585 318 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 ASPGQ86U10 573 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 SLCO6A1Q86UG4 719 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 BORCS5Q969J3 196 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 BCL2L14Q9BZR8 327 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 PDE7BQ9NP56 450 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 GPRC5BQ9NZH0 403 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 CD207Q9UJ71 328 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 MKL2Q9ULH7 1088 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 PCDHB3Q9Y5E6 796 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 GOLGA4Q13439 2230 aaKnown RBP13.04□□□□□ -0.32
LDB3-202ENST00000361373 TRPM3Q9HCF6 1732 aaPredicted RBP13.04□□□□□ -0.32
LDB3-202ENST00000361373 CHD4Q14839 1912 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 M0QX08 132 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 PDCD5O14737 125 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 TSC22D2O75157 780 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 KCNC1P48547 511 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 XKP51811 444 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 PDX1P52945 283 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 AP3S2P59780 193 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 UFM1P61960 85 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 TRIM74Q86UV6 250 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 TMEM25Q86YD3 366 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 TXNDC5Q8NBS9 432 aaKnown RBP13.04□□□□□ -0.32
LDB3-202ENST00000361373 CRELD1Q96HD1 420 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 KCNC2Q96PR1 638 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 HERPUD2Q9BSE4 406 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 COPS4Q9BT78 406 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 PTGES2Q9H7Z7 377 aa13.04□□□□□ -0.32
LDB3-202ENST00000361373 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms