RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 CPN2P22792 545 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 UQCRC1P31930 480 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 CDK6Q00534 326 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 CAPN13Q6MZZ7 669 aaPredicted RBP15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 SPATC1Q76KD6 591 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 PSD4Q8NDX1 1056 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 SMG7Q92540 1137 aaKnown RBP15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 CTRCQ99895 268 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 SMOC2Q9H3U7 446 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 NLKQ9UBE8 527 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 ITM2BQ9Y287 266 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 PCDHA9Q9Y5H5 950 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 IRAK3Q9Y616 596 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 A0A1B0GUL6 1792 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 GABARAPO95166 117 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 CXCR4P61073 352 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 SMN1Q16637 294 aaKnown RBP15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 SETMARQ53H47 684 aaPredicted RBP15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 CHMP1BQ7LBR1 199 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 TOMM5Q8N4H5 51 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 PIGKQ92643 395 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 UGT2A1Q9Y4X1 527 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 QSOX1O00391 747 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 STBD1O95210 358 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 C8GP07360 202 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 NSG1P42857 185 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 RUNDC3AQ59EK9 446 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 GHDCQ8N2G8 530 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 ZNF433Q8N7K0 673 aaPredicted RBP15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 TRPM4Q8TD43 1214 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 TXNDC15Q96J42 360 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 FAM129BQ96TA1 746 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 MCMBPQ9BTE3 642 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 MKRN2Q9H000 416 aaKnown RBP15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 OR1I1O60431 355 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 CAPN15O75808 1086 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 FGBP02675 491 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 HLA-DPB1P04440 258 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 PRDX3P30048 256 aaKnown RBP15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 CDH4P55283 916 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 ERVPABLB-1P60509 514 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 ADARB1P78563 741 aaKnown RBP15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 ATAD3CQ5T2N8 411 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 MED27Q6P2C8 311 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 B3GNT8Q7Z7M8 397 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 SLITRK4Q8IW52 837 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 RAVER1Q8IY67 606 aaKnown RBP15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 TNFAIP8L1Q8WVP5 186 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 ISL2Q96A47 359 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 TMEM169Q96HH4 297 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 SNX18Q96RF0 628 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 TMED9Q9BVK6 235 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 PPIL3Q9H2H8 161 aaKnown RBP15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 BOLA1Q9Y3E2 137 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 MAB21L2Q9Y586 359 aa15.5■□□□□ 0.07
CLSTN1-201ENST00000361311 AKAP8O43823 692 aaKnown RBP15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 S100A6P06703 90 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 CXCR2P25025 360 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 SMAD3P84022 425 aaKnown RBP15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 OR5AK3PQ8NH89 298 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 NFKBIDQ8NI38 313 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 FUBP1Q96AE4 644 aaKnown RBP15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 FAIM2Q9BWQ8 316 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 C1QTNF1Q9BXJ1 281 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 CD244Q9BZW8 370 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 RNF121Q9H920 327 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 RHCGQ9UBD6 479 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 IRS2Q9Y4H2 1338 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 HMX3A6NHT5 357 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 PCDH7O60245 1069 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 WEE1P30291 646 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 PPIGQ13427 754 aaKnown RBP eCLIP15.49■□□□□ 0.072e-6■■□□□ 13.1
CLSTN1-201ENST00000361311 ZNF648Q5T619 568 aaPredicted RBP15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 CXCL17Q6UXB2 119 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 FAM20CQ8IXL6 584 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 SETD6Q8TBK2 473 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 KAT2AQ92830 837 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 PEX13Q92968 403 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 HTATIP2Q9BUP3 242 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 DCAF13Q9NV06 445 aaKnown RBP15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 GTF2IRD1Q9UHL9 959 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 SLC22A14Q9Y267 594 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 H1F0P07305 194 aaKnown RBP15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 C21orf33P30042 268 aaPredicted RBP15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 FAUP35544 74 aaKnown RBP15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 DEFA5Q01523 94 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 ADPRMQ3LIE5 342 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 ATP13A5Q4VNC0 1218 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 ADNP2Q6IQ32 1131 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 FAM217AQ8IXS0 508 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 OXR1Q8N573 874 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 C1orf52Q8N6N3 182 aaKnown RBP15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 SLC22A17Q8WUG5 538 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 COL26A1Q96A83 441 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 HYLS1Q96M11 299 aa15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 NLE1Q9NVX2 485 aaPredicted RBP15.49■□□□□ 0.07
CLSTN1-201ENST00000361311 EPHB3P54753 998 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 AP3S2P59780 193 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 TGM3Q08188 693 aa15.48■□□□□ 0.07
CLSTN1-201ENST00000361311 C22orf42Q6IC83 251 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms