RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 NDUFA9Q16795 377 aa5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 FAM151BQ6UXP7 276 aa5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 CIARTQ8N365 385 aaPredicted RBP5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 MEIOBQ8N635 442 aa5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 APCDD1LQ8NCL9 501 aa5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 OR4K1Q8NGD4 311 aa5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 ZPLD1Q8TCW7 415 aa5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 BPIFA3Q9BQP9 254 aa5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 UTP6Q9NYH9 597 aaKnown RBP5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 MRPS18CQ9Y3D5 142 aaKnown RBP5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 ZNF839A8K0R7 811 aa5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 PRMT3O60678 531 aa5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 FTLP02792 175 aaPredicted RBP5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 ENDOUP21128 410 aaKnown RBP5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 MMRN1Q13201 1228 aa5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 MYBPHQ13203 477 aa5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 GUSBP1Q15486 140 aa5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 DBN1Q16643 649 aa5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 C1QTNF12Q5T7M4 302 aa5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 GALNTL5Q7Z4T8 443 aa5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 OR2M7Q8NG81 312 aa5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 ANP32BQ92688 251 aaKnown RBP5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 CALR3Q96L12 384 aaKnown RBP5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 TSSK1BQ9BXA7 367 aa5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 ARFGAP3Q9NP61 516 aa5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 DDX56Q9NY93 547 aaKnown RBP5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 DIDO1Q9BTC0 2240 aaKnown RBP5.57□□□□□ -1.52
CDC42SE2-201ENST00000360515 DEFB108AA8MXU0 73 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 ESPNB1AK53 854 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 INAFM1C9JVW0 142 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 KLHL10Q6JEL2 608 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 CCDC70Q6NSX1 233 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 AFTPHQ6ULP2 937 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 HOOK3Q86VS8 718 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 RPS19BP1Q86WX3 136 aaKnown RBP5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 RNF10Q8N5U6 811 aaKnown RBP5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 SARAFQ96BY9 339 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 DCUN1D1Q96GG9 259 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 FAM173AQ9BQD7 235 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 SFXN3Q9BWM7 321 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 NPLQ9BXD5 320 aaPredicted RBP5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 UCK2Q9BZX2 261 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 ZNF395Q9H8N7 513 aaPredicted RBP5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 ARMCX1Q9P291 453 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 ZNF223Q9UK11 482 aaPredicted RBP5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 RNF112Q9ULX5 631 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 AAR2Q9Y312 384 aaKnown RBP5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 LRRD1A4D1F6 860 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 H0YGG7 62 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 SMPD2O60906 423 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 HPNP05981 417 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 OR1D4P47884 311 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 TAS2R50P59544 299 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 ARF3P61204 181 aaPredicted RBP5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 PMPCAQ10713 525 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 CCDC122Q5T0U0 273 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 LYPD8Q6UX82 237 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 SLC22A16Q86VW1 577 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 ZZZ3Q8IYH5 903 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 NEK11Q8NG66 645 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 MAGEC3Q8TD91 643 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 RNF138Q8WVD3 245 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 HSPH1Q92598 858 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 GTPBP3Q969Y2 492 aaKnown RBP5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 C8orf44Q96CB5 159 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 MRFAP1L1Q96HT8 127 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 HES7Q9BYE0 225 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 DRC3Q9H069 523 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 CLSTN2Q9H4D0 955 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 TIMMDC1Q9NPL8 285 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 SHOC2Q9UQ13 582 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 YARS2Q9Y2Z4 477 aaKnown RBP5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 CFAP20Q9Y6A4 193 aaKnown RBP5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 LOC105369274A0A096LPK9 316 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 LOC102723532A0A0G2JNH3 316 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 ELOA3DA6NLF2 546 aaPredicted RBP5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 MAN1A2O60476 641 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 BCL6P41182 706 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 AVPR1BP47901 424 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 PTH2RP49190 550 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 PRDX1Q06830 199 aaKnown RBP5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 DEFB110Q30KQ9 67 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 ELOA3BQ3SY89 546 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 ACSF3Q4G176 576 aaPredicted RBP5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 FKBP15Q5T1M5 1219 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 ZNF468Q5VIY5 522 aaPredicted RBP5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 SPINK14Q6IE38 97 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 YTHDF3Q7Z739 585 aaKnown RBP5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 ULK2Q8IYT8 1036 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 OR4N4Q8N0Y3 316 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 ELOA3Q8NG57 546 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 RAD51AP1Q96B01 352 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 SGCZQ96LD1 299 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 ANGPTL4Q9BY76 406 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 KCNK13Q9HB14 408 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 PNPLA3Q9NST1 481 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 TMEM184CQ9NVA4 438 aa5.56□□□□□ -1.52
CDC42SE2-201ENST00000360515 STX7O15400 261 aaKnown RBP5.55□□□□□ -1.52
CDC42SE2-201ENST00000360515 PHF1O43189 567 aaPredicted RBP5.55□□□□□ -1.52
CDC42SE2-201ENST00000360515 RHOXF2BP0C7M4 288 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms