RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 SNX15Q9NRS6 342 aa16.2■□□□□ 0.18
FAM3D-201ENST00000358781 IGSF5Q9NSI5 407 aa16.2■□□□□ 0.18
FAM3D-201ENST00000358781 TLK1Q9UKI8 766 aa16.2■□□□□ 0.18
FAM3D-201ENST00000358781 NXT1Q9UKK6 140 aaKnown RBP16.2■□□□□ 0.18
FAM3D-201ENST00000358781 KCNE2Q9Y6J6 123 aa16.2■□□□□ 0.18
FAM3D-201ENST00000358781 A0A087X1B8 175 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 TRBC2A0A5B9 178 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 VSTM2BA6NLU5 285 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 MKRN2OSH3BPM6 223 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 TAPBPO15533 448 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 PRPF4O43172 522 aaKnown RBP eCLIP16.19■□□□□ 0.18
FAM3D-201ENST00000358781 FOXS1O43638 330 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 DNAJB5O75953 348 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 WDR47O94967 919 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 LTA4HP09960 611 aaKnown RBP16.19■□□□□ 0.18
FAM3D-201ENST00000358781 GGT5P36269 586 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 GDF5P43026 501 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 MEF2AQ02078 507 aaPredicted RBP16.19■□□□□ 0.18
FAM3D-201ENST00000358781 NFATC3Q12968 1075 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 CHAF1BQ13112 559 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 DSG2Q14126 1118 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 NDUFA9Q16795 377 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 PPP1R32Q7Z5V6 425 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 ASPGQ86U10 573 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 ISCA2Q86U28 154 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 TBC1D19Q8N5T2 526 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 MACROD1Q9BQ69 325 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 ALG9Q9H6U8 611 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 CD274Q9NZQ7 290 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 ZNF282Q9UDV7 671 aaPredicted RBP16.19■□□□□ 0.18
FAM3D-201ENST00000358781 RNF112Q9ULX5 631 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 ACOT9Q9Y305 439 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 MRPS2Q9Y399 296 aaKnown RBP16.19■□□□□ 0.18
FAM3D-201ENST00000358781 IGLV3-12A0A075B6K2 115 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 A0A0A6YYC8 382 aaPredicted RBP16.19■□□□□ 0.18
FAM3D-201ENST00000358781 I3L1I5 382 aaPredicted RBP16.19■□□□□ 0.18
FAM3D-201ENST00000358781 OR1F1O43749 312 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 C2P06681 752 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 INHBAP08476 426 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 TFEBP19484 476 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 KCNC1P48547 511 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 SERPINB8P50452 374 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 SNRPNP63162 240 aaKnown RBP16.19■□□□□ 0.18
FAM3D-201ENST00000358781 REEP5Q00765 189 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 OCA2Q04671 838 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 SULT1C3Q6IMI6 304 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 TMEM214Q6NUQ4 689 aaKnown RBP16.19■□□□□ 0.18
FAM3D-201ENST00000358781 NXPE4Q6UWF7 544 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 MED25Q71SY5 747 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 TMPRSS11BQ86T26 416 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 CENPLQ8N0S6 344 aaPredicted RBP16.19■□□□□ 0.18
FAM3D-201ENST00000358781 AMER3Q8N944 861 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 TMEM102Q8N9M5 508 aaPredicted RBP16.19■□□□□ 0.18
FAM3D-201ENST00000358781 PDPRQ8NCN5 879 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 ZNF740Q8NDX6 193 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 STAG3L4Q8TBR4 150 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 STT3BQ8TCJ2 826 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 KCTD4Q8WVF5 259 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 SLC13A3Q8WWT9 602 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 NACC2Q96BF6 587 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 MMABQ96EY8 250 aaPredicted RBP16.19■□□□□ 0.18
FAM3D-201ENST00000358781 PAFAH2Q99487 392 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 TMEM79Q9BSE2 394 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 SPNS1Q9H2V7 528 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 SOX17Q9H6I2 414 aaPredicted RBP16.19■□□□□ 0.18
FAM3D-201ENST00000358781 CNOT10Q9H9A5 744 aaKnown RBP16.19■□□□□ 0.18
FAM3D-201ENST00000358781 ACSS2Q9NR19 701 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 WWOXQ9NZC7 414 aa16.19■□□□□ 0.18
FAM3D-201ENST00000358781 SCN3AQ9NY46 2000 aa16.18■□□□□ 0.18
FAM3D-201ENST00000358781 A0A087WUV0 522 aaPredicted RBP16.18■□□□□ 0.18
FAM3D-201ENST00000358781 B8ZZF3 427 aa16.18■□□□□ 0.18
FAM3D-201ENST00000358781 PEX12O00623 359 aa16.18■□□□□ 0.18
FAM3D-201ENST00000358781 KERAO60938 352 aa16.18■□□□□ 0.18
FAM3D-201ENST00000358781 IPO13O94829 963 aaKnown RBP16.18■□□□□ 0.18
FAM3D-201ENST00000358781 ALDOAP04075 364 aaKnown RBP16.18■□□□□ 0.18
FAM3D-201ENST00000358781 S100BP04271 92 aaPredicted RBP16.18■□□□□ 0.18
FAM3D-201ENST00000358781 ZGLP1P0C6A0 271 aa16.18■□□□□ 0.18
FAM3D-201ENST00000358781 SLC35G6P0C7Q6 338 aa16.18■□□□□ 0.18
FAM3D-201ENST00000358781 MMP11P24347 488 aa16.18■□□□□ 0.18
FAM3D-201ENST00000358781 SCTRP47872 440 aa16.18■□□□□ 0.18
FAM3D-201ENST00000358781 CCL11P51671 97 aa16.18■□□□□ 0.18
FAM3D-201ENST00000358781 RRADP55042 308 aa16.18■□□□□ 0.18
FAM3D-201ENST00000358781 IRF9Q00978 393 aa16.18■□□□□ 0.18
FAM3D-201ENST00000358781 FAM83EQ2M2I3 478 aa16.18■□□□□ 0.18
FAM3D-201ENST00000358781 LACTB2Q53H82 288 aaPredicted RBP16.18■□□□□ 0.18
FAM3D-201ENST00000358781 SHISA6Q6ZSJ9 500 aa16.18■□□□□ 0.18
FAM3D-201ENST00000358781 TRMT10CQ7L0Y3 403 aaKnown RBP16.18■□□□□ 0.18
FAM3D-201ENST00000358781 UHMK1Q8TAS1 419 aaKnown RBP16.18■□□□□ 0.18
FAM3D-201ENST00000358781 MIEF2Q96C03 454 aa16.18■□□□□ 0.18
FAM3D-201ENST00000358781 NXNL1Q96CM4 212 aa16.18■□□□□ 0.18
FAM3D-201ENST00000358781 ATOH8Q96SQ7 321 aa16.18■□□□□ 0.18
FAM3D-201ENST00000358781 AIF1LQ9BQI0 150 aa16.18■□□□□ 0.18
FAM3D-201ENST00000358781 ZNF71Q9NQZ8 489 aaPredicted RBP16.18■□□□□ 0.18
FAM3D-201ENST00000358781 P4HTMQ9NXG6 502 aa16.18■□□□□ 0.18
FAM3D-201ENST00000358781 TRPC4Q9UBN4 977 aa16.18■□□□□ 0.18
FAM3D-201ENST00000358781 PTBP2Q9UKA9 531 aaKnown RBP16.18■□□□□ 0.18
FAM3D-201ENST00000358781 IKBKGQ9Y6K9 419 aa16.18■□□□□ 0.18
FAM3D-201ENST00000358781 NUP210LQ5VU65 1888 aa16.18■□□□□ 0.18
FAM3D-201ENST00000358781 A0A096LPK6 155 aa16.17■□□□□ 0.18
FAM3D-201ENST00000358781 NSA2O95478 260 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms