RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 FGFBP1Q14512 234 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 AADACL4Q5VUY2 407 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 PYROXD2Q8N2H3 581 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 TXNDC5Q8NBS9 432 aaKnown RBP8.53□□□□□ -1.04
COL6A6-201ENST00000358511 OR10H5Q8NGA6 315 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 OR8K3Q8NH51 312 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 SPPL2BQ8TCT7 592 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 DHRS1Q96LJ7 313 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 MRM3Q9HC36 420 aaKnown RBP8.53□□□□□ -1.04
COL6A6-201ENST00000358511 NPAP1Q9NZP6 1156 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 DNAJC27Q9NZQ0 273 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 ASF1AQ9Y294 204 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 PAK4O96013 591 aaPredicted RBP8.53□□□□□ -1.04
COL6A6-201ENST00000358511 H2AFB2P0C5Z0 115 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 CELF3Q5SZQ8 465 aaKnown RBP8.53□□□□□ -1.04
COL6A6-201ENST00000358511 CAND1Q86VP6 1230 aaKnown RBP8.53□□□□□ -1.04
COL6A6-201ENST00000358511 VWA5B2Q8N398 1253 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 SHKBP1Q8TBC3 707 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 PKP4Q99569 1192 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 RHBGQ9H310 441 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 TMEM185BQ9H7F4 350 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 ARMC1Q9NVT9 282 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 EXOSC1Q9Y3B2 195 aaKnown RBP8.53□□□□□ -1.04
COL6A6-201ENST00000358511 SPATA31C2B4DYI2 1134 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 NARSO43776 548 aaKnown RBP8.53□□□□□ -1.04
COL6A6-201ENST00000358511 RAB3BP20337 219 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 DCKP27707 260 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 NDST2P52849 883 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 NCS1P62166 190 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 GALEQ14376 348 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 SEC23BQ15437 767 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 COQ4Q9Y3A0 265 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 TRIP12Q14669 1992 aaPredicted RBP8.53□□□□□ -1.04
COL6A6-201ENST00000358511 MSI1O43347 362 aaKnown RBP8.53□□□□□ -1.04
COL6A6-201ENST00000358511 SNNO75324 88 aaPredicted RBP8.53□□□□□ -1.04
COL6A6-201ENST00000358511 LGALS2P05162 132 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 MAP3K8P41279 467 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 COL28A1Q2UY09 1125 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 CYBRD1Q53TN4 286 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 ZNF416Q9BWM5 594 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 ZNF334Q9HCZ1 680 aaPredicted RBP8.53□□□□□ -1.04
COL6A6-201ENST00000358511 BIN3Q9NQY0 253 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 P2RX2Q9UBL9 471 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 FARSAQ9Y285 508 aaKnown RBP8.53□□□□□ -1.04
COL6A6-201ENST00000358511 MED31Q9Y3C7 131 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 OTOL1A6NHN0 477 aaPredicted RBP8.53□□□□□ -1.04
COL6A6-201ENST00000358511 TLX2O43763 284 aaPredicted RBP8.53□□□□□ -1.04
COL6A6-201ENST00000358511 FARS2O95363 451 aaKnown RBP8.53□□□□□ -1.04
COL6A6-201ENST00000358511 NSG1P42857 185 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 DGKGP49619 791 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 RASGEF1BQ0VAM2 473 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 PROX2Q3B8N5 592 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 GPRC6AQ5T6X5 926 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 ZNF700Q9H0M5 742 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 EVA1BQ9NVM1 165 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 AJAP1Q9UKB5 411 aaPredicted RBP8.53□□□□□ -1.04
COL6A6-201ENST00000358511 NEMP2A6NFY4 417 aa8.52□□□□□ -1.04
COL6A6-201ENST00000358511 AGAP5A6NIR3 686 aa8.52□□□□□ -1.04
COL6A6-201ENST00000358511 TSPAN1O60635 241 aa8.52□□□□□ -1.04
COL6A6-201ENST00000358511 MRPS14O60783 128 aaKnown RBP8.52□□□□□ -1.04
COL6A6-201ENST00000358511 CYB5AP00167 134 aa8.52□□□□□ -1.04
COL6A6-201ENST00000358511 NUDT7P0C024 238 aa8.52□□□□□ -1.04
COL6A6-201ENST00000358511 NRIP1P48552 1158 aa8.52□□□□□ -1.04
COL6A6-201ENST00000358511 SLC3A1Q07837 685 aa8.52□□□□□ -1.04
COL6A6-201ENST00000358511 HNRNPDQ14103 355 aaKnown RBP8.52□□□□□ -1.04
COL6A6-201ENST00000358511 TXLNGYQ9BZA5 131 aa8.52□□□□□ -1.04
COL6A6-201ENST00000358511 ABCG5Q9H222 651 aa8.52□□□□□ -1.04
COL6A6-201ENST00000358511 EXTL2Q9UBQ6 330 aa8.52□□□□□ -1.04
COL6A6-201ENST00000358511 FBXO10Q9UK96 956 aa8.52□□□□□ -1.04
COL6A6-201ENST00000358511 C14orf166Q9Y224 244 aaKnown RBP8.52□□□□□ -1.04
COL6A6-201ENST00000358511 CLDN11O75508 207 aa8.52□□□□□ -1.04
COL6A6-201ENST00000358511 RFPL3O75679 317 aa8.52□□□□□ -1.04
COL6A6-201ENST00000358511 CSN2P05814 226 aa8.52□□□□□ -1.04
COL6A6-201ENST00000358511 SRCP12931 536 aa8.52□□□□□ -1.04
COL6A6-201ENST00000358511 IL1R2P27930 398 aa8.52□□□□□ -1.04
COL6A6-201ENST00000358511 HOXC12P31275 282 aa8.52□□□□□ -1.04
COL6A6-201ENST00000358511 NR4A2P43354 598 aa8.52□□□□□ -1.04
COL6A6-201ENST00000358511 GJA9P57773 515 aa8.52□□□□□ -1.04
COL6A6-201ENST00000358511 SNRPD2P62316 118 aaKnown RBP8.52□□□□□ -1.04
COL6A6-201ENST00000358511 KLHL26Q53HC5 615 aa8.52□□□□□ -1.04
COL6A6-201ENST00000358511 TNFAIP8L2Q6P589 184 aaPredicted RBP8.52□□□□□ -1.04
COL6A6-201ENST00000358511 MINDY1Q8N5J2 469 aa8.52□□□□□ -1.04
COL6A6-201ENST00000358511 NDNFQ8TB73 568 aa8.52□□□□□ -1.04
COL6A6-201ENST00000358511 ALDOAP04075 364 aaKnown RBP8.52□□□□□ -1.05
COL6A6-201ENST00000358511 CHRNB1P11230 501 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 DSC2Q02487 901 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 TFAP2BQ92481 460 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 CCDC120Q96HB5 630 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 ABCD2Q9UBJ2 740 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 ALPPP05187 535 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 PGAM2P15259 253 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 RHOQP17081 205 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 ASPAP45381 313 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 AVPR1BP47901 424 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 TAF1CQ15572 869 aaPredicted RBP8.52□□□□□ -1.05
COL6A6-201ENST00000358511 COQ5Q5HYK3 327 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 BCL2L15Q5TBC7 163 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 LCN8Q6JVE9 175 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 IQCHQ86VS3 1027 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 CADM2Q8N3J6 435 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms