RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 SLC6A13Q9NSD5 602 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 EBF1Q9UH73 591 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 BLOC1S6Q9UL45 172 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 PCDHB14Q9Y5E9 798 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 CACNA1IQ9P0X4 2223 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 HOXC11O43248 304 aaPredicted RBP13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 CREG1O75629 220 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 ELFN1P0C7U0 828 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 SLC6A11P48066 632 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 GZMMP51124 257 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 GALK1P51570 392 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 EMP3P54852 163 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 TMBIM6P55061 237 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 IRF8Q02556 426 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 ABHD18Q0P651 414 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 IL18R1Q13478 541 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 PLCL1Q15111 1095 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 PGS1Q32NB8 556 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 TMEM196Q5HYL7 178 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 ZC3H12BQ5HYM0 836 aaKnown RBP13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 THOC6Q86W42 341 aaKnown RBP13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 ETFBKMTQ8IXQ9 262 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 PHACTR4Q8IZ21 702 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 NRSN1Q8IZ57 195 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 EID3Q8N140 333 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 ZNF366Q8N895 744 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 OR13F1Q8NGS4 319 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 ATL1Q8WXF7 558 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 TMEM159Q96B96 161 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 TBC1D20Q96BZ9 403 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 AP2M1Q96CW1 435 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 FAM120BQ96EK7 910 aaKnown RBP13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 REXO5Q96IC2 774 aaKnown RBP13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 CCM2Q9BSQ5 444 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 INPP5KQ9BT40 448 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 TBCDQ9BTW9 1192 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 TOR3AQ9H497 397 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 FAM118AQ9NWS6 357 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 MRPS17Q9Y2R5 130 aaKnown RBP13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 GMEB1Q9Y692 573 aa13.8□□□□□ -0.2
NIPAL3-203ENST00000358028 SLC5A10A0PJK1 596 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 H3BMQ9 156 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 GNGT2O14610 69 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 PRMT3O60678 531 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 ABCB7O75027 752 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 CATP04040 527 aaKnown RBP13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 CHRNB1P11230 501 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 CD22P20273 847 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 BDKRB1P46663 353 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 PREPP48147 710 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 ST8SIA6P61647 398 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 CCINQ13939 588 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 NKG7Q16617 165 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 DPY19L1Q2PZI1 675 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 XKR6Q5GH73 641 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 NOXRED1Q6NXP6 359 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 AGTRAPQ6RW13 159 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 GCNT7Q6ZNI0 430 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 HIPK1Q86Z02 1210 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 SFTPA1Q8IWL2 248 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 FAM86B1Q8N7N1 296 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 DRAXINQ8NBI3 349 aaPredicted RBP13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 NELL1Q92832 810 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 CCDC138Q96M89 665 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 COG8Q96MW5 612 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 HHIPQ96QV1 700 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 PHOX2BQ99453 314 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 SOX17Q9H6I2 414 aaPredicted RBP13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 LIN28AQ9H9Z2 209 aaKnown RBP13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 GPRC5BQ9NZH0 403 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 STOX2Q9P2F5 926 aaPredicted RBP13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 CDC14AQ9UNH5 594 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 ITM2BQ9Y287 266 aa13.79□□□□□ -0.2
NIPAL3-203ENST00000358028 ANTXRLA6NF34 631 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 E7EQ34 232 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 PSMD11O00231 422 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 GALR2O43603 387 aaPredicted RBP13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 DNAJB5O75953 348 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 SEC14L2O76054 403 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 PRKD3O94806 890 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 LRATO95237 230 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 EGFP01133 1207 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 PCNAP12004 261 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 PTPN6P29350 595 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 SHMT2P34897 504 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 TRPC1P48995 793 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 TMEM115Q12893 351 aaPredicted RBP13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 DOC2AQ14183 400 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 ZIK1Q3SY52 487 aaPredicted RBP13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 GPR107Q5VW38 600 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 GRHL2Q6ISB3 625 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 Q6ZS52 159 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 ANKRD46Q86W74 232 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 RNF175Q8N4F7 328 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 WDR20Q8TBZ3 569 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 NCLNQ969V3 563 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 COQ10AQ96MF6 247 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 MBOAT4Q96T53 435 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 NELL2Q99435 816 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 WRAP53Q9BUR4 548 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms