RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 NDC1Q9BTX1 674 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 FAM83DQ9H4H8 585 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 UNKLQ9H9P5 680 aaKnown RBP11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 HSPE1-MOB4S4R3N1 261 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 ADAMTS13Q76LX8 1427 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 ARPC2O15144 300 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 MLLT6P55198 1093 aaPredicted RBP11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 HERV-K104P61576 105 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 CAPSQ13938 189 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 C3orf33Q6P1S2 294 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 HAS1Q92839 578 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 ST6GALNAC4Q9H4F1 302 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 NDUFAF4Q9P032 175 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 A0A1W2PPW3 197 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 A0A1W2PRQ8 180 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 RFPL1O75677 317 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 CRYZL1O95825 349 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 CYP3A5P20815 502 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 SLC1A2P43004 574 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 DHPSP49366 369 aaPredicted RBP11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 BLKP51451 505 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 FGL1Q08830 312 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 FADDQ13158 208 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 CRB2Q5IJ48 1285 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 PLEKHG7Q6ZR37 379 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 OR5B17Q8NGF7 314 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 TBC1D15Q8TC07 691 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 EDARQ9UNE0 448 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 B3GNT3Q9Y2A9 372 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 CMAHPQ9Y471 501 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 SNX10Q9Y5X0 201 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 MRPS14O60783 128 aaKnown RBP11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 SCARB2Q14108 478 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 CATSPERGQ6ZRH7 1159 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 C16orf58Q96GQ5 468 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 MSANTD3Q96H12 275 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 KLHL15Q96M94 604 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 ZBTB26Q9HCK0 441 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 HCN2Q9UL51 889 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 PCDHGC4Q9Y5F7 938 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 PTPRMP28827 1452 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 SLC35F4A4IF30 521 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 H3BUI4 141 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 J3QLW9 94 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 IRF6O14896 467 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 C8GP07360 202 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 MMP3P08254 477 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 ZNF19P17023 458 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 CLCNKBP51801 687 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 PAOXQ6QHF9 649 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 ZDHHC24Q6UX98 284 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 ZNF598Q86UK7 904 aaKnown RBP11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 NIPA2Q8N8Q9 360 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 FANCFQ9NPI8 374 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 C1orf109Q9NX04 203 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 DERAQ9Y315 318 aa11.2□□□□□ -0.62
SPTBN1-202ENST00000356805 ELNP15502 786 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 FPR1P21462 350 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 CBLP22681 906 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 NMBRP28336 390 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 DGKEP52429 567 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 GRIK2Q13002 908 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 XKR5Q6UX68 686 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 ZFPM1Q8IX07 1006 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 SAMD14Q8IZD0 417 aaPredicted RBP11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 ZDHHC4Q9NPG8 344 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 TRIM36Q9NQ86 728 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 IL36AQ9UHA7 158 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 MRPS17Q9Y2R5 130 aaKnown RBP11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 B8ZZF3 427 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 NDST3O95803 873 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 TNFP01375 233 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 ZNF14P17017 642 aaPredicted RBP11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 TACR2P21452 398 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 ZNF81P51508 661 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 C2orf27AQ580R0 203 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 BORAQ6PGQ7 559 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 SNX29P2Q8IUI4 249 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 OR4K17Q8NGC6 315 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 OR5AK3PQ8NH89 298 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 PPTC7Q8NI37 304 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 CANT1Q8WVQ1 401 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 TMEM125Q96AQ2 219 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 METTL7AQ9H8H3 244 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 SPIN1Q9Y657 262 aaPredicted RBP11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 A0A1W2PPL8 197 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 PSMD10O75832 226 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 POP4O95707 220 aaKnown RBP11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 RPS3P23396 243 aaKnown RBP eCLIP11.19□□□□□ -0.624e-10■□□□□ 11.3
SPTBN1-202ENST00000356805 CFL1P23528 166 aaKnown RBP11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 HOXD12P35452 270 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 INHBEP58166 350 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 AIMP2Q13155 320 aaKnown RBP11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 RABL3Q5HYI8 236 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 DNM1P34Q6PK57 102 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 VTCN1Q7Z7D3 282 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 AMZ2Q86W34 360 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 SPATA22Q8NHS9 363 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 SCGB1C1Q8TD33 95 aa11.19□□□□□ -0.62
SPTBN1-202ENST00000356805 POLR2J3Q9H1A7 115 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms