RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 MPTX1A8MV57 137 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 PSIP1O75475 530 aaKnown RBP15.24■□□□□ 0.03
RTN3-205ENST00000356000 ZNF3P17036 446 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 SSTR2P30874 369 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 BTG1P62324 171 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 PTPN11Q06124 597 aaPredicted RBP15.24■□□□□ 0.03
RTN3-205ENST00000356000 NPRL3Q12980 569 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 SSX1Q16384 188 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 ZNF699Q32M78 642 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 KLHL22Q53GT1 634 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 RGS7BPQ6MZT1 257 aaPredicted RBP15.24■□□□□ 0.03
RTN3-205ENST00000356000 ATRAIDQ6UW56 229 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 RASSF6Q6ZTQ3 369 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 ZNF655Q8N720 491 aaPredicted RBP15.24■□□□□ 0.03
RTN3-205ENST00000356000 HRASLS5Q96KN8 279 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 MGLLQ99685 303 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 MYOCQ99972 504 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 TAPBPLQ9BX59 468 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 SORBS1Q9BX66 1292 aaKnown RBP15.24■□□□□ 0.03
RTN3-205ENST00000356000 AMBNQ9NP70 447 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 GSN-AS1Q9NRJ2 163 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 SNTG1Q9NSN8 517 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 ERAP1Q9NZ08 941 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 PLCL2Q9UPR0 1127 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 CSADQ9Y600 493 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 CDH10Q9Y6N8 788 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 SELENOFO60613 162 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 LALBAP00709 142 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 HLA-FP30511 346 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 MAGEA2P43356 314 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 GDI2P50395 445 aaKnown RBP15.24■□□□□ 0.03
RTN3-205ENST00000356000 NFKB2Q00653 900 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 PWP1Q13610 501 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 GPR149Q86SP6 731 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 SPNS2Q8IVW8 549 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 PGBD3Q8N328 593 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 NETO2Q8NC67 525 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.24■□□□□ 0.034e-29■□□□□ 10.6
RTN3-205ENST00000356000 CREB3L1Q96BA8 519 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 ARL5BQ96KC2 179 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 KCNA7Q96RP8 456 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 MED28Q9H204 178 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 KCTD5Q9NXV2 234 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 MKL2Q9ULH7 1088 aa15.24■□□□□ 0.03
RTN3-205ENST00000356000 ZNF490Q9ULM2 529 aaPredicted RBP15.24■□□□□ 0.03
RTN3-205ENST00000356000 ELOVL7A1L3X0 281 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 H7C2Y5 167 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 SLURP2P0DP57 97 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 POU2F1P14859 743 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 JUPP14923 745 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 CPB1P15086 417 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 CYP2B6P20813 491 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 C2orf80Q0P641 193 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 PRKG2Q13237 762 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 SMAD2Q15796 467 aaKnown RBP15.23■□□□□ 0.03
RTN3-205ENST00000356000 ZNF284Q2VY69 593 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 SEZ6Q53EL9 994 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 NHLRC3Q5JS37 347 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 KIAA0907Q7Z7F0 614 aaPredicted RBP15.23■□□□□ 0.03
RTN3-205ENST00000356000 CCNYQ8ND76 341 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 OR2T4Q8NH00 348 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 C9orf43Q8TAL5 461 aaPredicted RBP15.23■□□□□ 0.03
RTN3-205ENST00000356000 PROKR1Q8TCW9 393 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 HGDQ93099 445 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 UCN3Q969E3 161 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 KRT84Q9NSB2 600 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 GPR83Q9NYM4 423 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 KLHL8Q9P2G9 620 aaPredicted RBP15.23■□□□□ 0.03
RTN3-205ENST00000356000 PHF11Q9UIL8 331 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 EDARQ9UNE0 448 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 MGAT4BQ9UQ53 548 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 NCKAP1Q9Y2A7 1128 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 PCDHGB7Q9Y5F8 929 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 H3BM21 787 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 ANXA3P12429 323 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 GOT1P17174 413 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 PTPRAP18433 802 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 SSTR4P31391 388 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 CLCN5P51795 746 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 PLIN5Q00G26 463 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 CDH18Q13634 790 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 ATP6AP1LQ52LC2 224 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 TRIQKQ629K1 86 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 SLC27A4Q6P1M0 643 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 BHLHB9Q6PI77 547 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 C5orf46Q6UWT4 87 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 GDPGP1Q6ZNW5 385 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 ABI3BPQ7Z7G0 1075 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 OR10A6Q8NH74 314 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 UBA3Q8TBC4 463 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 OR5M11Q96RB7 305 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 APOL2Q9BQE5 337 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 TMEM175Q9BSA9 504 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 DPH7Q9BTV6 452 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 ABCC13Q9NSE7 274 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 SLCO1C1Q9NYB5 712 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 NDRG3Q9UGV2 375 aa15.23■□□□□ 0.03
RTN3-205ENST00000356000 MICAL3Q7RTP6 2002 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 A0A1W2PQL4 384 aaPredicted RBP15.22■□□□□ 0.03
RTN3-205ENST00000356000 RAB19A4D1S5 217 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms