RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 INTS7Q9NVH2 962 aaKnown RBP10.65□□□□□ -0.7
RTN3-204ENST00000354497 RIC8BQ9NVN3 520 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 COQ3Q9NZJ6 369 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 STOX2Q9P2F5 926 aaPredicted RBP10.65□□□□□ -0.7
RTN3-204ENST00000354497 SCOCQ9UIL1 159 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 PPT2Q9UMR5 302 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 LUC7L2Q9Y383 392 aaKnown RBP10.65□□□□□ -0.7
RTN3-204ENST00000354497 IGHV1-45A0A0A0MS14 117 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 A0A1B0GVG6 124 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 HYKKA2RU49 373 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 HTR3EA5X5Y0 456 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 C3orf70A6NLC5 250 aaPredicted RBP10.64□□□□□ -0.71
RTN3-204ENST00000354497 A8MUI8 341 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 AKR1B15C9JRZ8 316 aaPredicted RBP10.64□□□□□ -0.71
RTN3-204ENST00000354497 MTRF1O75570 445 aaKnown RBP10.64□□□□□ -0.71
RTN3-204ENST00000354497 CRTAMO95727 393 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 AP2A1O95782 977 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 KLK2P20151 261 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 PKLRP30613 574 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 DNAJA1P31689 397 aaKnown RBP10.64□□□□□ -0.71
RTN3-204ENST00000354497 ST13P50502 369 aaKnown RBP10.64□□□□□ -0.71
RTN3-204ENST00000354497 IST1P53990 364 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 HSF1Q00613 529 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 SF1Q15637 639 aaKnown RBP10.64□□□□□ -0.71
RTN3-204ENST00000354497 ZNF658BQ4V348 819 aaPredicted RBP10.64□□□□□ -0.71
RTN3-204ENST00000354497 WASHC2DQ5SRD0 308 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 AGBL2Q5U5Z8 902 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 ATG9BQ674R7 924 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 KAZNQ674X7 775 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 FIGLAQ6QHK4 219 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 TGIF2LYQ8IUE0 185 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 TAB3Q8N5C8 712 aaPredicted RBP10.64□□□□□ -0.71
RTN3-204ENST00000354497 AMER2Q8N7J2 671 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 OR5K2Q8NHB8 316 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 WDR60Q8WVS4 1066 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 GIMAP1Q8WWP7 306 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 FAM136AQ96C01 138 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 HAUS1Q96CS2 278 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 IL17FQ96PD4 163 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 ZNF559Q9BR84 538 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 TMEM121Q9BTD3 319 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 STMN3Q9NZ72 180 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 SMARCAL1Q9NZC9 954 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 ZC3H7BQ9UGR2 993 aaKnown RBP10.64□□□□□ -0.71
RTN3-204ENST00000354497 ZNF835Q9Y2P0 537 aa10.64□□□□□ -0.71
RTN3-204ENST00000354497 FAM90A27PA6NNH2 459 aa10.63□□□□□ -0.71
RTN3-204ENST00000354497 ZNF487B1APH4 448 aa10.63□□□□□ -0.71
RTN3-204ENST00000354497 IDSB3KWA1 339 aa10.63□□□□□ -0.71
RTN3-204ENST00000354497 PFDN1O60925 122 aa10.63□□□□□ -0.71
RTN3-204ENST00000354497 FAM155BO75949 473 aa10.63□□□□□ -0.71
RTN3-204ENST00000354497 MED26O95402 600 aa10.63□□□□□ -0.71
RTN3-204ENST00000354497 SERPING1P05155 500 aa10.63□□□□□ -0.71
RTN3-204ENST00000354497 PORP16435 677 aaPredicted RBP10.63□□□□□ -0.71
RTN3-204ENST00000354497 ACRV1P26436 265 aa10.63□□□□□ -0.71
RTN3-204ENST00000354497 GEMP55040 296 aa10.63□□□□□ -0.71
RTN3-204ENST00000354497 SPCS2Q15005 226 aa10.63□□□□□ -0.71
RTN3-204ENST00000354497 FCRLBQ6BAA4 426 aa10.63□□□□□ -0.71
RTN3-204ENST00000354497 Q6ZPB1 254 aaPredicted RBP10.63□□□□□ -0.71
RTN3-204ENST00000354497 CEP128Q6ZU80 1094 aa10.63□□□□□ -0.71
RTN3-204ENST00000354497 TAOK1Q7L7X3 1001 aa10.63□□□□□ -0.71
RTN3-204ENST00000354497 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.63□□□□□ -0.71
RTN3-204ENST00000354497 SLC35F6Q8N357 371 aa10.63□□□□□ -0.71
RTN3-204ENST00000354497 THAP3Q8WTV1 239 aaPredicted RBP10.63□□□□□ -0.71
RTN3-204ENST00000354497 CTNNBL1Q8WYA6 563 aaPredicted RBP10.63□□□□□ -0.71
RTN3-204ENST00000354497 HES7Q9BYE0 225 aa10.63□□□□□ -0.71
RTN3-204ENST00000354497 RNF32Q9H0A6 362 aa10.63□□□□□ -0.71
RTN3-204ENST00000354497 ANKRD10Q9NXR5 420 aa10.63□□□□□ -0.71
RTN3-204ENST00000354497 UVRAGQ9P2Y5 699 aa10.63□□□□□ -0.71
RTN3-204ENST00000354497 TRPC4Q9UBN4 977 aa10.63□□□□□ -0.71
RTN3-204ENST00000354497 TEKT2Q9UIF3 430 aa10.63□□□□□ -0.71
RTN3-204ENST00000354497 LRCH1Q9Y2L9 728 aa10.63□□□□□ -0.71
RTN3-204ENST00000354497 FBN3Q75N90 2809 aa10.63□□□□□ -0.71
RTN3-204ENST00000354497 SEC16AO15027 2179 aa10.63□□□□□ -0.71
RTN3-204ENST00000354497 A0A0J9YVX5 310 aa10.62□□□□□ -0.71
RTN3-204ENST00000354497 MAGEA13PA6NCF6 341 aa10.62□□□□□ -0.71
RTN3-204ENST00000354497 NKX2-6A6NCS4 301 aa10.62□□□□□ -0.71
RTN3-204ENST00000354497 TMEM200CA6NKL6 621 aa10.62□□□□□ -0.71
RTN3-204ENST00000354497 AGAP14A8MT82 685 aa10.62□□□□□ -0.71
RTN3-204ENST00000354497 E7EVH7 732 aa10.62□□□□□ -0.71
RTN3-204ENST00000354497 PRRG2O14669 202 aa10.62□□□□□ -0.71
RTN3-204ENST00000354497 RASGRF2O14827 1237 aa10.62□□□□□ -0.71
RTN3-204ENST00000354497 SLCO2B1O94956 709 aa10.62□□□□□ -0.71
RTN3-204ENST00000354497 TSPAN12O95859 305 aa10.62□□□□□ -0.71
RTN3-204ENST00000354497 SERPINC1P01008 464 aa10.62□□□□□ -0.71
RTN3-204ENST00000354497 GSTM1P09488 218 aa10.62□□□□□ -0.71
RTN3-204ENST00000354497 H2AFZP0C0S5 128 aa10.62□□□□□ -0.71
RTN3-204ENST00000354497 ERVK-10P10266 1014 aa10.62□□□□□ -0.71
RTN3-204ENST00000354497 ACADLP28330 430 aa10.62□□□□□ -0.71
RTN3-204ENST00000354497 ZNF140P52738 457 aaPredicted RBP10.62□□□□□ -0.71
RTN3-204ENST00000354497 AP2B1P63010 937 aa10.62□□□□□ -0.71
RTN3-204ENST00000354497 MYBPHQ13203 477 aa10.62□□□□□ -0.71
RTN3-204ENST00000354497 KPNB1Q14974 876 aaKnown RBP10.62□□□□□ -0.71
RTN3-204ENST00000354497 GPR33Q49SQ1 333 aa10.62□□□□□ -0.71
RTN3-204ENST00000354497 PDCD4Q53EL6 469 aaKnown RBP10.62□□□□□ -0.71
RTN3-204ENST00000354497 KRTCAP3Q53RY4 240 aa10.62□□□□□ -0.71
RTN3-204ENST00000354497 FRMPD2BQ6IN97 320 aa10.62□□□□□ -0.71
RTN3-204ENST00000354497 PRMT9Q6P2P2 845 aa10.62□□□□□ -0.71
RTN3-204ENST00000354497 RIPOR1Q6ZS17 1223 aa10.62□□□□□ -0.71
RTN3-204ENST00000354497 H2AFVQ71UI9 128 aa10.62□□□□□ -0.71
RTN3-204ENST00000354497 EID3Q8N140 333 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms