RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 SF1Q15637 639 aaKnown RBP16.08■□□□□ 0.16
SAMM50-201ENST00000350028 NKG7Q16617 165 aa16.08■□□□□ 0.16
SAMM50-201ENST00000350028 METRNLQ641Q3 311 aa16.08■□□□□ 0.16
SAMM50-201ENST00000350028 CPZQ66K79 652 aa16.08■□□□□ 0.16
SAMM50-201ENST00000350028 ZNF776Q68DI1 518 aaPredicted RBP16.08■□□□□ 0.16
SAMM50-201ENST00000350028 PARM1Q6UWI2 310 aa16.08■□□□□ 0.16
SAMM50-201ENST00000350028 CHRDL2Q6WN34 429 aa16.08■□□□□ 0.16
SAMM50-201ENST00000350028 C10orf111Q8N326 155 aa16.08■□□□□ 0.16
SAMM50-201ENST00000350028 PGBD3Q8N328 593 aa16.08■□□□□ 0.16
SAMM50-201ENST00000350028 FAM86B1Q8N7N1 296 aa16.08■□□□□ 0.16
SAMM50-201ENST00000350028 FAM47BQ8NA70 645 aa16.08■□□□□ 0.16
SAMM50-201ENST00000350028 SPDYE1Q8NFV5 336 aaPredicted RBP16.08■□□□□ 0.16
SAMM50-201ENST00000350028 TSPAN14Q8NG11 270 aa16.08■□□□□ 0.16
SAMM50-201ENST00000350028 OR5AR1Q8NGP9 310 aa16.08■□□□□ 0.16
SAMM50-201ENST00000350028 PYURFQ96I23 114 aa16.08■□□□□ 0.16
SAMM50-201ENST00000350028 CAAP1Q9H8G2 361 aa16.08■□□□□ 0.16
SAMM50-201ENST00000350028 ATP6V1HQ9UI12 483 aa16.08■□□□□ 0.16
SAMM50-201ENST00000350028 PCDHB11Q9Y5F2 797 aa16.08■□□□□ 0.16
SAMM50-201ENST00000350028 GMEB1Q9Y692 573 aa16.08■□□□□ 0.16
SAMM50-201ENST00000350028 PCM1Q15154 2024 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 GNG14A0A1W2PPG7 69 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 H0YAE9 185 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 SH3BGRLO75368 114 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 HPRP00739 348 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 SERPINA1P01009 418 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 CST1P01037 141 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 ERGP11308 486 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 GALK1P51570 392 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 ALDH3A2P51648 485 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 ZNF763Q0D2J5 394 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 DAG1Q14118 895 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 MYBPC3Q14896 1274 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 HKDC1Q2TB90 917 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 CES5AQ6NT32 575 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 TBPL2Q6SJ96 375 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 ISLR2Q6UXK2 745 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 SATL1Q86VE3 508 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 KRT78Q8N1N4 520 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 SVOPLQ8N434 492 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 GPR156Q8NFN8 814 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 CYGBQ8WWM9 190 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 SNX19Q92543 992 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 SDCCAG3Q96C92 435 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 SPATA9Q9BWV2 254 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 LGR4Q9BXB1 951 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 CLK4Q9HAZ1 481 aaKnown RBP16.07■□□□□ 0.16
SAMM50-201ENST00000350028 AASDHPPTQ9NRN7 309 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 BTBD3Q9Y2F9 522 aa16.07■□□□□ 0.16
SAMM50-201ENST00000350028 CKAP5Q14008 2032 aa16.06■□□□□ 0.16
SAMM50-201ENST00000350028 RFXAPO00287 272 aa16.06■□□□□ 0.16
SAMM50-201ENST00000350028 ATP6V1B1P15313 513 aa16.06■□□□□ 0.16
SAMM50-201ENST00000350028 TRIM23P36406 574 aa16.06■□□□□ 0.16
SAMM50-201ENST00000350028 ARSFP54793 590 aa16.06■□□□□ 0.16
SAMM50-201ENST00000350028 CYP2A13Q16696 494 aa16.06■□□□□ 0.16
SAMM50-201ENST00000350028 VMACQ2NL98 169 aa16.06■□□□□ 0.16
SAMM50-201ENST00000350028 KCTD21Q4G0X4 260 aa16.06■□□□□ 0.16
SAMM50-201ENST00000350028 C2orf27AQ580R0 203 aa16.06■□□□□ 0.16
SAMM50-201ENST00000350028 TMEM214Q6NUQ4 689 aaKnown RBP16.06■□□□□ 0.16
SAMM50-201ENST00000350028 ZNF551Q7Z340 670 aaPredicted RBP16.06■□□□□ 0.16
SAMM50-201ENST00000350028 R3HCC1LQ7Z5L2 792 aaKnown RBP16.06■□□□□ 0.16
SAMM50-201ENST00000350028 ZDHHC13Q8IUH4 622 aa16.06■□□□□ 0.16
SAMM50-201ENST00000350028 ADHFE1Q8IWW8 467 aa16.06■□□□□ 0.16
SAMM50-201ENST00000350028 CLECL1Q8IZS7 167 aa16.06■□□□□ 0.16
SAMM50-201ENST00000350028 LMNTD1Q8N9Z9 388 aa16.06■□□□□ 0.16
SAMM50-201ENST00000350028 OR5K2Q8NHB8 316 aa16.06■□□□□ 0.16
SAMM50-201ENST00000350028 FGF14Q92915 247 aa16.06■□□□□ 0.16
SAMM50-201ENST00000350028 SH3KBP1Q96B97 665 aa16.06■□□□□ 0.16
SAMM50-201ENST00000350028 RDH12Q96NR8 316 aa16.06■□□□□ 0.16
SAMM50-201ENST00000350028 IL17FQ96PD4 163 aa16.06■□□□□ 0.16
SAMM50-201ENST00000350028 BHLHE41Q9C0J9 482 aaPredicted RBP16.06■□□□□ 0.16
SAMM50-201ENST00000350028 REEP4Q9H6H4 257 aa16.06■□□□□ 0.16
SAMM50-201ENST00000350028 PELI2Q9HAT8 420 aa16.06■□□□□ 0.16
SAMM50-201ENST00000350028 MBNL1Q9NR56 388 aaKnown RBP16.06■□□□□ 0.16
SAMM50-201ENST00000350028 PHPT1Q9NRX4 125 aaPredicted RBP16.06■□□□□ 0.16
SAMM50-201ENST00000350028 SPATA7Q9P0W8 599 aa16.06■□□□□ 0.16
SAMM50-201ENST00000350028 ACSL5Q9ULC5 683 aa16.06■□□□□ 0.16
SAMM50-201ENST00000350028 SAMD4AQ9UPU9 718 aaKnown RBP16.06■□□□□ 0.16
SAMM50-201ENST00000350028 CORO2BQ9UQ03 480 aa16.06■□□□□ 0.16
SAMM50-201ENST00000350028 TDRKHQ9Y2W6 561 aaKnown RBP16.06■□□□□ 0.16
SAMM50-201ENST00000350028 XIRP2A4UGR9 3374 aa16.06■□□□□ 0.16
SAMM50-201ENST00000350028 TRIOBPQ9H2D6 2365 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 MYOCOSA0A1B0GUC4 107 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 A0A1W2PP55 124 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 RNASET2O00584 256 aaKnown RBP16.05■□□□□ 0.16
SAMM50-201ENST00000350028 GNGT2O14610 69 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 YY2O15391 372 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 KCNK5O95279 499 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 TGFB1P01137 390 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 ALBP02768 609 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 PTX3P26022 381 aaPredicted RBP16.05■□□□□ 0.16
SAMM50-201ENST00000350028 KIR2DL1P43626 348 aaPredicted RBP16.05■□□□□ 0.16
SAMM50-201ENST00000350028 TUBA4AP68366 448 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 ADARB1P78563 741 aaKnown RBP16.05■□□□□ 0.16
SAMM50-201ENST00000350028 IRF4Q15306 451 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 CNPY1Q3B7I2 92 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 CYBRD1Q53TN4 286 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 ANKRD26P1Q6NSI1 321 aa16.05■□□□□ 0.16
SAMM50-201ENST00000350028 ZCCHC8Q6NZY4 707 aaKnown RBP16.05■□□□□ 0.16
SAMM50-201ENST00000350028 TTC33Q6PID6 262 aaPredicted RBP16.05■□□□□ 0.16
SAMM50-201ENST00000350028 ARMCX6Q7L4S7 300 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms