RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 ERN2Q76MJ5 926 aaKnown RBP13.41□□□□□ -0.26
TRIM4-201ENST00000349062 CARM1Q86X55 608 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 ZDHHC13Q8IUH4 622 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 ARL10Q8N8L6 244 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 WDR48Q8TAF3 677 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 USP7Q93009 1102 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 CIDECQ96AQ7 238 aaPredicted RBP13.41□□□□□ -0.26
TRIM4-201ENST00000349062 FAM129BQ96TA1 746 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 DGCR6LQ9BY27 220 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 SLC2A11Q9BYW1 496 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 CLMPQ9H6B4 373 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 RUBCNLQ9H714 662 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 INIPQ9NRY2 104 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 BAG5Q9UL15 447 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 MAP4K5Q9Y4K4 846 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 IGLV3-16A0A075B6K0 115 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 YY2O15391 372 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 DEAF1O75398 565 aaPredicted RBP13.4□□□□□ -0.26
TRIM4-201ENST00000349062 CREG1O75629 220 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 GPIP06744 558 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 JUPP14923 745 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 IL7RP16871 459 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 CCT8P50990 548 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 AP1S2P56377 157 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 LSM3P62310 102 aaKnown RBP13.4□□□□□ -0.26
TRIM4-201ENST00000349062 LRRC74AQ0VAA2 488 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 RAB39AQ14964 217 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 UAP1L1Q3KQV9 507 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 ZBED5Q49AG3 693 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 CAPN13Q6MZZ7 669 aaPredicted RBP13.4□□□□□ -0.26
TRIM4-201ENST00000349062 TRIM46Q7Z4K8 759 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 TBC1D21Q8IYX1 336 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 TMCO5AQ8N6Q1 288 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 OR52J3Q8NH60 311 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 FGF14Q92915 247 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 MBNL1Q9NR56 388 aaKnown RBP13.4□□□□□ -0.26
TRIM4-201ENST00000349062 GPSM3Q9Y4H4 160 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 SCN2AQ99250 2005 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 EDDM13A0A1B0GTR0 161 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 FUOMA2VDF0 154 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 TTC36A6NLP5 189 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 H7BY64 318 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 FUCA1P04066 466 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 GSTM1P09488 218 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 ALPPL2P10696 532 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 CD72P21854 359 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 SLC6A12P48065 614 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 ALDH3B2P48448 385 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 TXNL4AP83876 142 aaKnown RBP13.4□□□□□ -0.26
TRIM4-201ENST00000349062 GSTM4Q03013 218 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 RUNX3Q13761 415 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 Q6ZNX1 250 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 FRMD1Q8N878 549 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 SGCDQ92629 289 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 TIFAQ96CG3 184 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 CCDC138Q96M89 665 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 MUS81Q96NY9 551 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 PRAP1Q96NZ9 151 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 TRIM39Q9HCM9 518 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 PPIL1Q9Y3C6 166 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 ST14Q9Y5Y6 855 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 SPTBP11277 2137 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 SCN3AQ9NY46 2000 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 TBC1D3DA0A087WVF3 549 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 TBC1D3IA0A087WXS9 549 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 TBC1D3EA0A087X179 549 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 TBC1D3KA0A087X1G2 549 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 TBC1D3FA6NER0 549 aaPredicted RBP13.4□□□□□ -0.26
TRIM4-201ENST00000349062 OR52A4PA6NMU1 304 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 TBC1D3LB9A6J9 549 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 G3V2T6 193 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 PCDH7O60245 1069 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 MITFO75030 526 aaPredicted RBP13.4□□□□□ -0.26
TRIM4-201ENST00000349062 EPN2O95208 641 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 TBC1D3HP0C7X1 549 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 BMXP51813 675 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 CLDN8P56748 225 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 RPS26P62854 115 aaKnown RBP13.4□□□□□ -0.26
TRIM4-201ENST00000349062 C2orf80Q0P641 193 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 PON2Q15165 354 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 PDGFRLQ15198 375 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.4□□□□□ -0.26
TRIM4-201ENST00000349062 CPTPQ5TA50 214 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 TBC1D3GQ6DHY5 549 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 TBC1D3CQ6IPX1 549 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 BORAQ6PGQ7 559 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 ZNF547Q8IVP9 402 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 MICU2Q8IYU8 434 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 TBC1D3Q8IZP1 549 aaPredicted RBP13.4□□□□□ -0.26
TRIM4-201ENST00000349062 HERVK_113Q902F9 699 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 TFGQ92734 400 aaPredicted RBP13.4□□□□□ -0.26
TRIM4-201ENST00000349062 ARMC1Q9NVT9 282 aa13.4□□□□□ -0.26
TRIM4-201ENST00000349062 TCRBV5S2A0A599 114 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 WASHC1A8K0Z3 465 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 H3BMQ9 156 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 SPINT1O43278 529 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 CBFA2T3O75081 653 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 SLCO2B1O94956 709 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 C1orf105O95561 183 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 CDH3P22223 829 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms