RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 C1orf216Q8TAB5 229 aa17.92■□□□□ 0.46
PTN-201ENST00000348225 SLC37A2Q8TED4 501 aa17.92■□□□□ 0.46
PTN-201ENST00000348225 ZDHHC1Q8WTX9 485 aa17.92■□□□□ 0.46
PTN-201ENST00000348225 SLC13A3Q8WWT9 602 aa17.92■□□□□ 0.46
PTN-201ENST00000348225 EDAQ92838 391 aa17.92■□□□□ 0.46
PTN-201ENST00000348225 TESCQ96BS2 214 aa17.92■□□□□ 0.46
PTN-201ENST00000348225 C11orf24Q96F05 449 aaPredicted RBP17.92■□□□□ 0.46
PTN-201ENST00000348225 PRMT8Q9NR22 394 aaPredicted RBP17.92■□□□□ 0.46
PTN-201ENST00000348225 AHSPQ9NZD4 102 aa17.92■□□□□ 0.46
PTN-201ENST00000348225 SPASTQ9UBP0 616 aa17.92■□□□□ 0.46
PTN-201ENST00000348225 VILLO15195 856 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 OR1F1O43749 312 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 PCDH7O60245 1069 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 SH3BGRLO75368 114 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 PDGFBP01127 241 aaPredicted RBP17.91■□□□□ 0.46
PTN-201ENST00000348225 TACR1P25103 407 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 DPP6P42658 865 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 C21orf59P57076 290 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 ZNF423Q2M1K9 1284 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 DPY19L1Q2PZI1 675 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 FAM174BQ3ZCQ3 159 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 PRR23BQ6ZRT6 265 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 VN1R5Q7Z5H4 357 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 HPS6Q86YV9 775 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 ADGRF3Q8IZF5 1079 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 NAGSQ8N159 534 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 DPP10Q8N608 796 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 KRTCAP2Q8N6L1 136 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 WDR60Q8WVS4 1066 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 PATE1Q8WXA2 126 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 CCDC124Q96CT7 223 aaKnown RBP17.91■□□□□ 0.46
PTN-201ENST00000348225 LRRC58Q96CX6 371 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 GPATCH1Q9BRR8 931 aaKnown RBP17.91■□□□□ 0.46
PTN-201ENST00000348225 OR51B5Q9H339 312 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 IL1RL2Q9HB29 575 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 SLC6A20Q9NP91 592 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 SNX7Q9UNH6 387 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 DOLKQ9UPQ8 538 aa17.91■□□□□ 0.46
PTN-201ENST00000348225 ARHGEF17Q96PE2 2063 aaPredicted RBP17.91■□□□□ 0.46
PTN-201ENST00000348225 IGKV1-8A0A0C4DH67 115 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 FEZF1A0PJY2 475 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 TRIM38O00635 465 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 SEMA3DO95025 777 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 LMNAP02545 664 aaKnown RBP17.9■□□□□ 0.46
PTN-201ENST00000348225 PGRP06401 933 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 ANXA4P09525 319 aaPredicted RBP17.9■□□□□ 0.46
PTN-201ENST00000348225 ME2P23368 584 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 FNTBP49356 437 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 AFF3P51826 1226 aaKnown RBP17.9■□□□□ 0.46
PTN-201ENST00000348225 DGKQP52824 942 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 C21orf58P58505 322 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 HNRNPKP61978 463 aaKnown RBP eCLIP17.9■□□□□ 0.46
PTN-201ENST00000348225 SNCBQ16143 134 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 PAGE3Q5JUK9 113 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 SPANXN4Q5MJ08 99 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 SAMD4BQ5PRF9 694 aaKnown RBP17.9■□□□□ 0.46
PTN-201ENST00000348225 SLC2A7Q6PXP3 512 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 TSSK4Q6SA08 328 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 RIPOR1Q6ZS17 1223 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 ARMCX6Q7L4S7 300 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 COMMD6Q7Z4G1 85 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 DHDDSQ86SQ9 333 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 C11orf74Q86VG3 221 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 WDR5BQ86VZ2 330 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 METTL4Q8N3J2 472 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 ANKRD53Q8N9V6 530 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 LMX1AQ8TE12 382 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 STMN2Q93045 179 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 CENPKQ9BS16 269 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 DPH7Q9BTV6 452 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 CAAP1Q9H8G2 361 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 TMEM181Q9P2C4 612 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 POMPQ9Y244 141 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 PCDHGA2Q9Y5H1 932 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 C15orf38-AP3S2A0A0A6YYH1 394 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 GNG14A0A1W2PPG7 69 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 B4DGG1 531 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 BTN3A3O00478 584 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 BCAT2O15382 392 aaPredicted RBP17.9■□□□□ 0.46
PTN-201ENST00000348225 LAMTOR5O43504 91 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 ENTPD5O75356 428 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 S100A3P33764 101 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 ACTR3P61158 418 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 CYP4F2P78329 520 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 RAE1P78406 368 aaKnown RBP17.9■□□□□ 0.46
PTN-201ENST00000348225 MAPKAPK3Q16644 382 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 KHDRBS2Q5VWX1 349 aaKnown RBP17.9■□□□□ 0.46
PTN-201ENST00000348225 MSANTD1Q6ZTZ1 278 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 ARPINQ7Z6K5 226 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 RIMKLAQ8IXN7 391 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 SDR16C5Q8N3Y7 309 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 FBXL6Q8N531 539 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 EFCAB3Q8N7B9 438 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 TMEM74Q96NL1 305 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 MS4A8Q9BY19 250 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 TWSG1Q9GZX9 223 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 BCAP29Q9UHQ4 241 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 ENTPD2Q9Y5L3 495 aa17.9■□□□□ 0.46
PTN-201ENST00000348225 HEATR5BQ9P2D3 2071 aa17.89■□□□□ 0.45
PTN-201ENST00000348225 FXYD1O00168 92 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms