RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 TRIM31Q9BZY9 425 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 DRC3Q9H069 523 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 RNF32Q9H0A6 362 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 PCBD2Q9H0N5 130 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 ATG10Q9H0Y0 220 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 PARVBQ9HBI1 364 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 TMEM184CQ9NVA4 438 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 ADAMTS6Q9UKP5 1117 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 CHMP2BQ9UQN3 213 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 PDE10AQ9Y233 779 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 NOTCH2Q04721 2471 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 USP27XA6NNY8 438 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 IDSB3KWA1 339 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 EIF3FO00303 357 aaPredicted RBP11.78□□□□□ -0.52
SGCA-202ENST00000344627 P2RX6O15547 441 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 BMP10O95393 424 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 SERPINA7P05543 415 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 SAT1P21673 171 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 HRH2P25021 359 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 GABRB3P28472 473 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 GRK3P35626 688 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 ELK3P41970 407 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 PAFAH1B1P43034 410 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 IL2P60568 153 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 TBPL1P62380 186 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 MAT1AQ00266 395 aaKnown RBP11.78□□□□□ -0.52
SGCA-202ENST00000344627 DR1Q01658 176 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 DSG2Q14126 1118 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 MORF4L2Q15014 288 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 SYT16Q17RD7 645 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 ATG9BQ674R7 924 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 AGTRAPQ6RW13 159 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 SYDE1Q6ZW31 735 aaPredicted RBP11.78□□□□□ -0.52
SGCA-202ENST00000344627 ANKMY2Q8IV38 441 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 DNAJB8Q8NHS0 232 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 SUN3Q8TAQ9 357 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 RELTQ969Z4 430 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 RUNDC3BQ96NL0 473 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 NAPGQ99747 312 aaPredicted RBP11.78□□□□□ -0.52
SGCA-202ENST00000344627 MACROD1Q9BQ69 325 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 TRIM54Q9BYV2 358 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 TGIF2Q9GZN2 237 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 SYNPO2LQ9H987 977 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 MKKSQ9NPJ1 570 aaPredicted RBP11.78□□□□□ -0.52
SGCA-202ENST00000344627 OLAHQ9NV23 265 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 RIC8BQ9NVN3 520 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 ARL15Q9NXU5 204 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 SLC17A6Q9P2U8 582 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 TEKT2Q9UIF3 430 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 MKL2Q9ULH7 1088 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 MRPS2Q9Y399 296 aaKnown RBP11.78□□□□□ -0.52
SGCA-202ENST00000344627 CSAG2Q9Y5P2 127 aa11.78□□□□□ -0.52
SGCA-202ENST00000344627 KLF2Q9Y5W3 355 aaPredicted RBP11.78□□□□□ -0.52
SGCA-202ENST00000344627 HIVEP3Q5T1R4 2406 aa11.77□□□□□ -0.52
SGCA-202ENST00000344627 ZGRF1Q86YA3 2104 aa11.77□□□□□ -0.52
SGCA-202ENST00000344627 FEZF1A0PJY2 475 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 E2F3O00716 465 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 LRRTM2O43300 516 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 WFS1O76024 890 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 CRYABP02511 175 aaKnown RBP11.77□□□□□ -0.53
SGCA-202ENST00000344627 SERPIND1P05546 499 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 SLC26A3P40879 764 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 PGGT1BP53609 377 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 ITGA8P53708 1063 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 ARL4CP56559 192 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 RPS15AP62244 130 aaKnown RBP11.77□□□□□ -0.53
SGCA-202ENST00000344627 ARG2P78540 354 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 TIAL1Q01085 375 aaKnown RBP eCLIP11.77□□□□□ -0.53
SGCA-202ENST00000344627 Q0VFX4 171 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 ART3Q13508 389 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 FAM53BQ14153 422 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 TEDDM1Q5T9Z0 273 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 HECTD2Q5U5R9 776 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 ZNF787Q6DD87 383 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 HIST2H2BCQ6DN03 193 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 KIAA0408Q6ZU52 694 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 LRRC56Q8IYG6 542 aaPredicted RBP11.77□□□□□ -0.53
SGCA-202ENST00000344627 CAMKVQ8NCB2 501 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 OR9A4Q8NGU2 314 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 ZCCHC10Q8TBK6 192 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 METTL21AQ8WXB1 218 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 TRIM51Q9BSJ1 452 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 FAM129AQ9BZQ8 928 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 PTGFRNQ9P2B2 879 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 SUCOQ9UBS9 1254 aaKnown RBP11.77□□□□□ -0.53
SGCA-202ENST00000344627 NTNG1Q9Y2I2 539 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 VWA7Q9Y334 891 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 SAR1BQ9Y6B6 198 aa11.77□□□□□ -0.53
SGCA-202ENST00000344627 SLC16A5O15375 505 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 TTI1O43156 1089 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 FOXS1O43638 330 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 JRKO75564 520 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 MLYCDO95822 493 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 GUCA1CO95843 209 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 CDH1P12830 882 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 CCND1P24385 295 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 IVDP26440 423 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 CSNK1G2P78368 415 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 RBPJQ06330 500 aa11.76□□□□□ -0.53
SGCA-202ENST00000344627 SP140Q13342 867 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms