RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 RHCGQ9UBD6 479 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 CFAP20Q9Y6A4 193 aaKnown RBP14.38□□□□□ -0.11
CLCN1-201ENST00000343257 C2orf81A6NN90 581 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 NT5C1B-RDH14C9J2C7 533 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 J3KTA2 159 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 MANBAO00462 879 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 AP2A2O94973 939 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 PDYNP01213 254 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 CAV3P56539 151 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 SPIBQ01892 262 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 RUNX1T1Q06455 604 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 CDONQ4KMG0 1287 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 PTRHD1Q6GMV3 140 aaKnown RBP14.38□□□□□ -0.11
CLCN1-201ENST00000343257 SBSNQ6UWP8 590 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 BCDIN3DQ7Z5W3 292 aaKnown RBP14.38□□□□□ -0.11
CLCN1-201ENST00000343257 GRAMD2AQ8IUY3 354 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 TIGD4Q8IY51 512 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 FLCNQ8NFG4 579 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 PITX2Q99697 317 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 BOCQ9BWV1 1114 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 ACPTQ9BZG2 426 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 SRRQ9GZT4 340 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 DOCK1Q14185 1865 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 PDCD11Q14690 1871 aaKnown RBP14.38□□□□□ -0.11
CLCN1-201ENST00000343257 FABP12A6NFH5 140 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 STX7O15400 261 aaKnown RBP14.38□□□□□ -0.11
CLCN1-201ENST00000343257 CDRT1O95170 752 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 KCNK5O95279 499 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 SMPD1P17405 629 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 GANABQ14697 944 aaKnown RBP14.38□□□□□ -0.11
CLCN1-201ENST00000343257 QPRTQ15274 297 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 FAHD1Q6P587 224 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 ZZZ3Q8IYH5 903 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 SLC34A3Q8N130 599 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 LKAAEAR1Q8TD35 194 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 CIPCQ9C0C6 399 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 RNF121Q9H920 327 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 ATP13A2Q9NQ11 1180 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 LATS2Q9NRM7 1088 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 KCNN3Q9UGI6 736 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 RPS6KA6Q9UK32 745 aa14.38□□□□□ -0.11
CLCN1-201ENST00000343257 A8MX80 341 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 SLC28A1O00337 649 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 POLR1CO15160 346 aaPredicted RBP14.37□□□□□ -0.11
CLCN1-201ENST00000343257 SLC25A27O95847 323 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 CYP17A1P05093 508 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 THP07101 528 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 RHOQP17081 205 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 KCNQ1P51787 676 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 CCL23P55773 120 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 C19orf57Q0VDD7 668 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 CSTF3Q12996 717 aaKnown RBP14.37□□□□□ -0.11
CLCN1-201ENST00000343257 PRAMEF19Q5SWL8 479 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 KLHL17Q6TDP4 642 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 FAM124AQ86V42 546 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 PMEPA1Q969W9 287 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 APIPQ96GX9 242 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 UCKL1Q9NWZ5 548 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 SLC23A1Q9UHI7 598 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 FZD9O00144 591 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 MMP3P08254 477 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 CSF3P09919 207 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 MAD2L1Q13257 205 aaPredicted RBP14.37□□□□□ -0.11
CLCN1-201ENST00000343257 DDX39BQ13838 428 aaKnown RBP14.37□□□□□ -0.11
CLCN1-201ENST00000343257 TATDN3Q17R31 274 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 FAM205BPQ63HN1 556 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 PAQR6Q6TCH4 344 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.37□□□□□ -0.11
CLCN1-201ENST00000343257 PLPP6Q8IY26 295 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 FAM83DQ9H4H8 585 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 CSNK1G1Q9HCP0 422 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 C12orf4Q9NQ89 552 aa14.37□□□□□ -0.11
CLCN1-201ENST00000343257 FAM227AF5H4B4 570 aa14.36□□□□□ -0.11
CLCN1-201ENST00000343257 PTPN6P29350 595 aa14.36□□□□□ -0.11
CLCN1-201ENST00000343257 GPC1P35052 558 aa14.36□□□□□ -0.11
CLCN1-201ENST00000343257 PBX3P40426 434 aa14.36□□□□□ -0.11
CLCN1-201ENST00000343257 DSC3Q14574 896 aa14.36□□□□□ -0.11
CLCN1-201ENST00000343257 AGMOQ6ZNB7 445 aa14.36□□□□□ -0.11
CLCN1-201ENST00000343257 ATCAYQ86WG3 371 aa14.36□□□□□ -0.11
CLCN1-201ENST00000343257 GPR65Q8IYL9 337 aa14.36□□□□□ -0.11
CLCN1-201ENST00000343257 VWA5B2Q8N398 1253 aa14.36□□□□□ -0.11
CLCN1-201ENST00000343257 KLHDC9Q8NEP7 349 aa14.36□□□□□ -0.11
CLCN1-201ENST00000343257 OR52E4Q8NGH9 312 aa14.36□□□□□ -0.11
CLCN1-201ENST00000343257 ANGPTL6Q8NI99 470 aa14.36□□□□□ -0.11
CLCN1-201ENST00000343257 SKA2Q8WVK7 121 aaPredicted RBP14.36□□□□□ -0.11
CLCN1-201ENST00000343257 COPS8Q99627 209 aa14.36□□□□□ -0.11
CLCN1-201ENST00000343257 C11orf16Q9NQ32 467 aa14.36□□□□□ -0.11
CLCN1-201ENST00000343257 NLKQ9UBE8 527 aa14.36□□□□□ -0.11
CLCN1-201ENST00000343257 RABL2BQ9UNT1 228 aa14.36□□□□□ -0.11
CLCN1-201ENST00000343257 TNPO3Q9Y5L0 923 aaKnown RBP14.36□□□□□ -0.11
CLCN1-201ENST00000343257 ALG5Q9Y673 324 aa14.36□□□□□ -0.11
CLCN1-201ENST00000343257 FNDC1Q4ZHG4 1894 aaPredicted RBP14.36□□□□□ -0.11
CLCN1-201ENST00000343257 CTSHP09668 335 aa14.36□□□□□ -0.11
CLCN1-201ENST00000343257 CTPS1P17812 591 aa14.36□□□□□ -0.11
CLCN1-201ENST00000343257 MAPK12P53778 367 aa14.36□□□□□ -0.11
CLCN1-201ENST00000343257 HNRNPA0Q13151 305 aaKnown RBP14.36□□□□□ -0.11
CLCN1-201ENST00000343257 PPIGQ13427 754 aaKnown RBP eCLIP14.36□□□□□ -0.11
CLCN1-201ENST00000343257 EIF4EBP2Q13542 120 aaPredicted RBP14.36□□□□□ -0.11
CLCN1-201ENST00000343257 CDH18Q13634 790 aa14.36□□□□□ -0.11
CLCN1-201ENST00000343257 PCBP2Q15366 365 aaKnown RBP eCLIP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms