RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 KIAA0513O60268 411 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 CXCR2P25025 360 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 DGKEP52429 567 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 DEFA1P59665 94 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 DEFA3P59666 94 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 MRPS15P82914 257 aaKnown RBP21.63■■□□□ 1.05
TRIM28-202ENST00000341753 ST3GAL4Q11206 333 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 ZXDCQ2QGD7 858 aaPredicted RBP21.63■■□□□ 1.05
TRIM28-202ENST00000341753 CYP27C1Q4G0S4 372 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 TMC5Q6UXY8 1006 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 NRARPQ7Z6K4 114 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 SLC5A8Q8N695 610 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 DNAJB8Q8NHS0 232 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 SKA2Q8WVK7 121 aaPredicted RBP21.63■■□□□ 1.05
TRIM28-202ENST00000341753 CASD1Q96PB1 797 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 OR5M11Q96RB7 305 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 TM6SF2Q9BZW4 377 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 ADPRHL2Q9NX46 363 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 PLXNA3P51805 1871 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 LOC110117498-PIK3R3F6TDL0 507 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 ADRA2AP08913 450 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 IRF1P10914 325 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 POU2F1P14859 743 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 MAGEA11P43364 429 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 SP3Q02447 781 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 DOC2BQ14184 412 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 DUOXA1Q1HG43 343 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 IQCCQ4KMZ1 466 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 SPPL2AQ8TCT8 520 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 PCDHB7Q9Y5E2 793 aa21.63■■□□□ 1.05
TRIM28-202ENST00000341753 MAGEB17A8MXT2 336 aa21.62■■□□□ 1.05
TRIM28-202ENST00000341753 CD160O95971 181 aa21.62■■□□□ 1.05
TRIM28-202ENST00000341753 PAX3P23760 479 aa21.62■■□□□ 1.05
TRIM28-202ENST00000341753 GKP32189 559 aa21.62■■□□□ 1.05
TRIM28-202ENST00000341753 GGT2P36268 569 aa21.62■■□□□ 1.05
TRIM28-202ENST00000341753 CDH4P55283 916 aa21.62■■□□□ 1.05
TRIM28-202ENST00000341753 RING1Q06587 406 aa21.62■■□□□ 1.05
TRIM28-202ENST00000341753 ZNF648Q5T619 568 aaPredicted RBP21.62■■□□□ 1.05
TRIM28-202ENST00000341753 BHMTQ93088 406 aa21.62■■□□□ 1.05
TRIM28-202ENST00000341753 C7orf34Q96L11 122 aa21.62■■□□□ 1.05
TRIM28-202ENST00000341753 TMEM161AQ9NX61 479 aa21.62■■□□□ 1.05
TRIM28-202ENST00000341753 RAPGEFL1Q9UHV5 662 aa21.62■■□□□ 1.05
TRIM28-202ENST00000341753 WBP11Q9Y2W2 641 aaKnown RBP21.62■■□□□ 1.05
TRIM28-202ENST00000341753 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.62■■□□□ 1.05
TRIM28-202ENST00000341753 AZGP1P25311 298 aaKnown RBP21.62■■□□□ 1.05
TRIM28-202ENST00000341753 OR1E2P47887 323 aa21.62■■□□□ 1.05
TRIM28-202ENST00000341753 ZNF177Q13360 481 aaPredicted RBP21.62■■□□□ 1.05
TRIM28-202ENST00000341753 MED22Q15528 200 aa21.62■■□□□ 1.05
TRIM28-202ENST00000341753 LRRC26Q2I0M4 334 aa21.62■■□□□ 1.05
TRIM28-202ENST00000341753 ZSWIM9Q86XI8 627 aa21.62■■□□□ 1.05
TRIM28-202ENST00000341753 RBFAQ8N0V3 343 aa21.62■■□□□ 1.05
TRIM28-202ENST00000341753 ELMOD1Q8N336 334 aa21.62■■□□□ 1.05
TRIM28-202ENST00000341753 WBP2Q969T9 261 aa21.62■■□□□ 1.05
TRIM28-202ENST00000341753 CEP19Q96LK0 163 aa21.62■■□□□ 1.05
TRIM28-202ENST00000341753 PEX16Q9Y5Y5 336 aa21.62■■□□□ 1.05
TRIM28-202ENST00000341753 H3BQ06 376 aaPredicted RBP21.61■■□□□ 1.05
TRIM28-202ENST00000341753 PRPS2P11908 318 aa21.61■■□□□ 1.05
TRIM28-202ENST00000341753 HTR3AP46098 478 aa21.61■■□□□ 1.05
TRIM28-202ENST00000341753 KCNJ10P78508 379 aa21.61■■□□□ 1.05
TRIM28-202ENST00000341753 UGT8Q16880 541 aa21.61■■□□□ 1.05
TRIM28-202ENST00000341753 NCEH1Q6PIU2 408 aa21.61■■□□□ 1.05
TRIM28-202ENST00000341753 SYT12Q8IV01 421 aa21.61■■□□□ 1.05
TRIM28-202ENST00000341753 TESCQ96BS2 214 aa21.61■■□□□ 1.05
TRIM28-202ENST00000341753 NIPSNAP1Q9BPW8 284 aa21.61■■□□□ 1.05
TRIM28-202ENST00000341753 PRM3Q9NNZ6 103 aa21.61■■□□□ 1.05
TRIM28-202ENST00000341753 ZNF226Q9NYT6 803 aa21.61■■□□□ 1.05
TRIM28-202ENST00000341753 CCDC59Q9P031 241 aaKnown RBP21.61■■□□□ 1.05
TRIM28-202ENST00000341753 TBC1D24Q9ULP9 559 aa21.61■■□□□ 1.05
TRIM28-202ENST00000341753 ACPPP15309 386 aa21.61■■□□□ 1.05
TRIM28-202ENST00000341753 SLC15A1P46059 708 aa21.61■■□□□ 1.05
TRIM28-202ENST00000341753 RPIAP49247 311 aa21.61■■□□□ 1.05
TRIM28-202ENST00000341753 GPR17Q13304 367 aa21.61■■□□□ 1.05
TRIM28-202ENST00000341753 IRF3Q14653 427 aa21.61■■□□□ 1.05
TRIM28-202ENST00000341753 TSTQ16762 297 aaKnown RBP21.61■■□□□ 1.05
TRIM28-202ENST00000341753 ZMAT1Q5H9K5 638 aa21.61■■□□□ 1.05
TRIM28-202ENST00000341753 GPRC6AQ5T6X5 926 aa21.61■■□□□ 1.05
TRIM28-202ENST00000341753 LRRC66Q68CR7 880 aa21.61■■□□□ 1.05
TRIM28-202ENST00000341753 NOXRED1Q6NXP6 359 aa21.61■■□□□ 1.05
TRIM28-202ENST00000341753 TTYH2Q9BSA4 534 aa21.61■■□□□ 1.05
TRIM28-202ENST00000341753 TSEN34Q9BSV6 310 aaKnown RBP21.61■■□□□ 1.05
TRIM28-202ENST00000341753 GABARAPL3Q9BY60 117 aa21.61■■□□□ 1.05
TRIM28-202ENST00000341753 PLSCR3Q9NRY6 295 aa21.61■■□□□ 1.05
TRIM28-202ENST00000341753 LYVE1Q9Y5Y7 322 aa21.61■■□□□ 1.05
TRIM28-202ENST00000341753 SLC38A8A6NNN8 435 aa21.6■■□□□ 1.05
TRIM28-202ENST00000341753 RGS5O15539 181 aa21.6■■□□□ 1.05
TRIM28-202ENST00000341753 KLKB1P03952 638 aa21.6■■□□□ 1.05
TRIM28-202ENST00000341753 COX7A2P14406 83 aa21.6■■□□□ 1.05
TRIM28-202ENST00000341753 HOXB6P17509 224 aaKnown RBP21.6■■□□□ 1.05
TRIM28-202ENST00000341753 ITPKAP23677 461 aa21.6■■□□□ 1.05
TRIM28-202ENST00000341753 HMGCLP35914 325 aa21.6■■□□□ 1.05
TRIM28-202ENST00000341753 NFATC2Q13469 925 aa21.6■■□□□ 1.05
TRIM28-202ENST00000341753 TSEN54Q7Z6J9 526 aaKnown RBP21.6■■□□□ 1.05
TRIM28-202ENST00000341753 ZNF605Q86T29 641 aa21.6■■□□□ 1.05
TRIM28-202ENST00000341753 SH3KBP1Q96B97 665 aa21.6■■□□□ 1.05
TRIM28-202ENST00000341753 SLC29A3Q9BZD2 475 aa21.6■■□□□ 1.05
TRIM28-202ENST00000341753 IL26Q9NPH9 171 aa21.6■■□□□ 1.05
TRIM28-202ENST00000341753 CRLS1Q9UJA2 301 aa21.6■■□□□ 1.05
TRIM28-202ENST00000341753 BTBD3Q9Y2F9 522 aa21.6■■□□□ 1.05
TRIM28-202ENST00000341753 K7ERQ8 282 aa21.6■■□□□ 1.05
TRIM28-202ENST00000341753 TNFRSF11BO00300 401 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms