RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 A0A088AWK7 358 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 A8MU76 341 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 BTN3A3O00478 584 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 BTN3A1O00481 513 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 KIF1CO43896 1103 aaKnown RBP9.9□□□□□ -0.82
TPM3-207ENST00000341372 HAUS5O94927 633 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 MATN4O95460 622 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 RPN2P04844 631 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 TUBBP07437 444 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 F7P08709 466 aaPredicted RBP9.9□□□□□ -0.82
TPM3-207ENST00000341372 NELFEP18615 380 aaKnown RBP9.9□□□□□ -0.82
TPM3-207ENST00000341372 CD9P21926 228 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 CD40P25942 277 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 GABRB3P28472 473 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 TNFRSF8P28908 595 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 PKLRP30613 574 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 CSE1LP55060 971 aaKnown RBP9.9□□□□□ -0.82
TPM3-207ENST00000341372 KYNUQ16719 465 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 UGT8Q16880 541 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 TEDDM1Q5T9Z0 273 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 CACHD1Q5VU97 1274 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 MBNL2Q5VZF2 373 aaKnown RBP9.9□□□□□ -0.82
TPM3-207ENST00000341372 FAM92BQ6ZTR7 304 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 CDH24Q86UP0 819 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 AMIGO1Q86WK6 493 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 ZBTB2Q8N680 514 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 GSDMBQ8TAX9 411 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 CFAP36Q96G28 342 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 TEFMQ96QE5 360 aaKnown RBP9.9□□□□□ -0.82
TPM3-207ENST00000341372 MAP3K3Q99759 626 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 ASPNQ9BXN1 380 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 PITPNM3Q9BZ71 974 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 SRMSQ9H3Y6 488 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 ARGLU1Q9NWB6 273 aaPredicted RBP9.9□□□□□ -0.82
TPM3-207ENST00000341372 OR6C2Q9NZP2 312 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 GALPQ9UBC7 116 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 CORO1CQ9ULV4 474 aaPredicted RBP9.9□□□□□ -0.82
TPM3-207ENST00000341372 BTRCQ9Y297 605 aa9.9□□□□□ -0.82
TPM3-207ENST00000341372 LAMA5O15230 3695 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 IGHV5-51A0A0C4DH38 117 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 E5RI56 91 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 GSNP06396 782 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 MAP2K6P52564 334 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 TIAL1Q01085 375 aaKnown RBP eCLIP9.89□□□□□ -0.83
TPM3-207ENST00000341372 GUCY2DQ02846 1103 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 PRKAA1Q13131 559 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 FAM153CQ494X1 144 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 HP1BP3Q5SSJ5 553 aaPredicted RBP9.89□□□□□ -0.83
TPM3-207ENST00000341372 CPZQ66K79 652 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 MTERF4Q7Z6M4 381 aaKnown RBP9.89□□□□□ -0.83
TPM3-207ENST00000341372 DTX1Q86Y01 620 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 ZBED8Q8IZ13 594 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 FLVCR1-AS1Q8TAF5 88 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 FBXO25Q8TCJ0 367 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 CD200R1Q8TD46 325 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 NRTNQ99748 197 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 ZPBPQ9BS86 351 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 DPH1Q9BZG8 443 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 SPRY4Q9C004 299 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 CCDC68Q9H2F9 335 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 SLC39A1Q9NY26 324 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 SLC13A4Q9UKG4 626 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 DHRS7Q9Y394 339 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 B3GALT1Q9Y5Z6 326 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 C2orf74A8MZ97 194 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 RRP8O43159 456 aaKnown RBP9.89□□□□□ -0.83
TPM3-207ENST00000341372 RASSF9O75901 435 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 C1orf105O95561 183 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 AHSGP02765 367 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 MSL3P1P0C860 447 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 ENO3P13929 434 aaPredicted RBP9.89□□□□□ -0.83
TPM3-207ENST00000341372 POLR2CP19387 275 aaPredicted RBP9.89□□□□□ -0.83
TPM3-207ENST00000341372 CHRM3P20309 590 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 RAB28P51157 221 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 MGAT5Q09328 741 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 DAG1Q14118 895 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 TIGD6Q17RP2 521 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.89□□□□□ -0.832e-17■□□□□ 10.2
TPM3-207ENST00000341372 TTLL9Q3SXZ7 439 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 ACSBG2Q5FVE4 666 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 LCE2DQ5TA82 110 aaPredicted RBP9.89□□□□□ -0.83
TPM3-207ENST00000341372 ANKS6Q68DC2 871 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 ARMC6Q6NXE6 501 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 CYS1Q717R9 158 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 FAM129CQ86XR2 697 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 SPACA3Q8IXA5 215 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 D2HGDHQ8N465 521 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 RNF141Q8WVD5 230 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 KCNE4Q8WWG9 221 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 ZNF837Q96EG3 531 aaPredicted RBP9.89□□□□□ -0.83
TPM3-207ENST00000341372 FAM129AQ9BZQ8 928 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 XKR8Q9H6D3 395 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 C1GALT1Q9NS00 363 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 SLC17A6Q9P2U8 582 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 NFS1Q9Y697 457 aa9.89□□□□□ -0.83
TPM3-207ENST00000341372 ITPR1Q14643 2758 aa9.88□□□□□ -0.83
TPM3-207ENST00000341372 A0A1W2PPH5 198 aa9.88□□□□□ -0.83
TPM3-207ENST00000341372 RASGRF2O14827 1237 aa9.88□□□□□ -0.83
TPM3-207ENST00000341372 ATP8B1O43520 1251 aa9.88□□□□□ -0.83
TPM3-207ENST00000341372 VPS26AO75436 327 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms