RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 SMIM30A4D0T7 59 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 IGSF6O95976 241 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 ITGAMP11215 1152 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 AOAHP28039 575 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 AP1S1P61966 158 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 CCDC92Q53HC0 331 aaPredicted RBP13.91□□□□□ -0.18
CPSF7-201ENST00000340437 ZNF852Q6ZMS4 543 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 CHST9Q7L1S5 443 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 CMTM7Q96FZ5 175 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 IL4I1Q96RQ9 567 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 BRD9Q9H8M2 597 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 TRIM39Q9HCM9 518 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 SCHIP1Q9P0W5 487 aaPredicted RBP13.91□□□□□ -0.18
CPSF7-201ENST00000340437 VPS29Q9UBQ0 182 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 DICER1Q9UPY3 1922 aaKnown RBP13.91□□□□□ -0.18
CPSF7-201ENST00000340437 KPNA5O15131 536 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 TGM1P22735 817 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 B4GALNT1Q00973 533 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 TPRG1LQ5T0D9 272 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 STEAP3Q658P3 488 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 PTOV1Q86YD1 416 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 HJURPQ8NCD3 748 aaPredicted RBP13.91□□□□□ -0.18
CPSF7-201ENST00000340437 SLIRPQ9GZT3 109 aaKnown RBP13.91□□□□□ -0.18
CPSF7-201ENST00000340437 ABCB8Q9NUT2 735 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 CFAP97Q9P2B7 532 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 TET1Q8NFU7 2136 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 F5P12259 2224 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 TMEM202A6NGA9 273 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 GRK5P34947 590 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 CTSKP43235 329 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 BDKRB1P46663 353 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 MC1RQ01726 317 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 LMAN2Q12907 356 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 IL18R1Q13478 541 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 STARD3Q14849 445 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 PLEKHG6Q3KR16 790 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 ARMCX4Q5H9R4 360 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 SYT6Q5T7P8 510 aaPredicted RBP13.91□□□□□ -0.18
CPSF7-201ENST00000340437 TSPYL5Q86VY4 417 aaPredicted RBP13.91□□□□□ -0.18
CPSF7-201ENST00000340437 UBE2J2Q8N2K1 259 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 ZNF366Q8N895 744 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 CENPOQ9BU64 300 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 KLF16Q9BXK1 252 aaPredicted RBP13.91□□□□□ -0.18
CPSF7-201ENST00000340437 MTG2Q9H4K7 406 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 ERVK13-1Q9NX77 482 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 ZDHHC3Q9NYG2 299 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 DNMT3BQ9UBC3 853 aaKnown RBP13.91□□□□□ -0.18
CPSF7-201ENST00000340437 YIPF1Q9Y548 306 aa13.91□□□□□ -0.18
CPSF7-201ENST00000340437 FAM227AF5H4B4 570 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 M0QX08 132 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 CYP2A7P20853 494 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 PRPS1L1P21108 318 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 PTPN6P29350 595 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 CAP1Q01518 475 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 SMARCB1Q12824 385 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 SF3B4Q15427 424 aaKnown RBP eCLIP13.9□□□□□ -0.181e-9■■■■■ 29.1
CPSF7-201ENST00000340437 SYTL3Q4VX76 610 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 LRIF1Q5T3J3 769 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 BBS7Q8IWZ6 715 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 OR10G2Q8NGC3 310 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 RHOXF1Q8NHV9 184 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 SLC38A4Q969I6 547 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 NIPSNAP1Q9BPW8 284 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 SLC29A3Q9BZD2 475 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 RAB23Q9ULC3 237 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 WDR37Q9Y2I8 494 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 GABRR3A8MPY1 467 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 GFRA2O00451 464 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 C9P02748 559 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 PABPC1P11940 636 aaKnown RBP13.9□□□□□ -0.18
CPSF7-201ENST00000340437 ST3GAL4Q11206 333 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 DOC2AQ14183 400 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 COX20Q5RI15 118 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 RSBN1Q5VWQ0 802 aaPredicted RBP13.9□□□□□ -0.18
CPSF7-201ENST00000340437 GATAD2AQ86YP4 633 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 ZNF513Q8N8E2 541 aaPredicted RBP13.9□□□□□ -0.18
CPSF7-201ENST00000340437 YIPF2Q9BWQ6 316 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 RNF186Q9NXI6 227 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 PCDHGA6Q9Y5G7 932 aa13.9□□□□□ -0.18
CPSF7-201ENST00000340437 MAP1BP46821 2468 aaKnown RBP13.9□□□□□ -0.18
CPSF7-201ENST00000340437 ETHE1O95571 254 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 FEN1P39748 380 aaKnown RBP13.89□□□□□ -0.19
CPSF7-201ENST00000340437 PPP5CP53041 499 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 DESI1Q6ICB0 168 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 CAPN13Q6MZZ7 669 aaPredicted RBP13.89□□□□□ -0.19
CPSF7-201ENST00000340437 MACC1Q6ZN28 852 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 EIF3MQ7L2H7 374 aaKnown RBP13.89□□□□□ -0.19
CPSF7-201ENST00000340437 PRSS48Q7RTY5 328 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 AKAP14Q86UN6 197 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 ZNF675Q8TD23 568 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 NDRG4Q9ULP0 352 aaKnown RBP13.89□□□□□ -0.19
CPSF7-201ENST00000340437 ZNF232Q9UNY5 417 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 OR2A25A4D2G3 310 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 MFN2O95140 757 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 TGFB1P01137 390 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 ALOX5P09917 674 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 LHCGRP22888 699 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 PPM1FP49593 454 aaPredicted RBP13.89□□□□□ -0.19
CPSF7-201ENST00000340437 SELENBP1Q13228 472 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 EXOC3L2Q2M3D2 409 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms