RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 RSPO4Q2I0M5 234 aaPredicted RBP17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 PHF19Q5T6S3 580 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 RNF165Q6ZSG1 346 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 PLD3Q8IV08 490 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 AFAP1L2Q8N4X5 818 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 WDR20Q8TBZ3 569 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 FAR2Q96K12 515 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 ADGRE2Q9UHX3 823 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 PCDHGA4Q9Y5G9 962 aa17.13■□□□□ 0.33
SDCBP2-201ENST00000339987 FEZF1A0PJY2 475 aa17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 MANBAO00462 879 aa17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 OR1F1O43749 312 aa17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 LCMT2O60294 686 aaKnown RBP17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 PIK3CBP42338 1070 aa17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 GABRA4P48169 554 aa17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 HK2P52789 917 aa17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 IFT88Q13099 833 aa17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 RBBP5Q15291 538 aaKnown RBP17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 UGT3A2Q3SY77 523 aa17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 TMTC4Q5T4D3 741 aa17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 FRG2Q64ET8 278 aa17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 CLEC6AQ6EIG7 209 aa17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 DHRS13Q6UX07 377 aa17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 FAM47EQ6ZV65 393 aa17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 B3GNT8Q7Z7M8 397 aa17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 CACTIN-AS1Q8N1I8 211 aa17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 USP7Q93009 1102 aa17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 PRR11Q96HE9 360 aaPredicted RBP17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 ZNF317Q96PQ6 595 aaPredicted RBP17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 FRG2BQ96QU4 278 aa17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 OR2A5Q96R48 311 aa17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 ELOVL6Q9H5J4 265 aa17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 ZFP69BQ9UJL9 534 aa17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 TIMM22Q9Y584 194 aa17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 AP1M2Q9Y6Q5 423 aa17.12■□□□□ 0.33
SDCBP2-201ENST00000339987 A0A0J9YVX5 310 aa17.11■□□□□ 0.33
SDCBP2-201ENST00000339987 TMEM233B4DJY2 109 aa17.11■□□□□ 0.33
SDCBP2-201ENST00000339987 SLCO1B7G3V0H7 640 aa17.11■□□□□ 0.33
SDCBP2-201ENST00000339987 FFAR3O14843 346 aa17.11■□□□□ 0.33
SDCBP2-201ENST00000339987 GPR42O15529 346 aa17.11■□□□□ 0.33
SDCBP2-201ENST00000339987 KCNK5O95279 499 aa17.11■□□□□ 0.33
SDCBP2-201ENST00000339987 CHEK2O96017 543 aa17.11■□□□□ 0.33
SDCBP2-201ENST00000339987 MT-CO3P00414 261 aa17.11■□□□□ 0.33
SDCBP2-201ENST00000339987 LSP1P33241 339 aa17.11■□□□□ 0.33
SDCBP2-201ENST00000339987 GNGT1P63211 74 aa17.11■□□□□ 0.33
SDCBP2-201ENST00000339987 CYP4F3Q08477 520 aa17.11■□□□□ 0.33
SDCBP2-201ENST00000339987 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.11■□□□□ 0.33
SDCBP2-201ENST00000339987 ANKRD53Q8N9V6 530 aa17.11■□□□□ 0.33
SDCBP2-201ENST00000339987 PIWIL2Q8TC59 973 aaKnown RBP17.11■□□□□ 0.33
SDCBP2-201ENST00000339987 AGR3Q8TD06 166 aa17.11■□□□□ 0.33
SDCBP2-201ENST00000339987 DEPDC7Q96QD5 511 aa17.11■□□□□ 0.33
SDCBP2-201ENST00000339987 PNPOQ9NVS9 261 aa17.11■□□□□ 0.33
SDCBP2-201ENST00000339987 PPT2Q9UMR5 302 aa17.11■□□□□ 0.33
SDCBP2-201ENST00000339987 PLCL2Q9UPR0 1127 aa17.11■□□□□ 0.33
SDCBP2-201ENST00000339987 ADAMTS20P59510 1910 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 SERTM1A2A2V5 107 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 ANKDD1BA6NHY2 528 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 FOXE1O00358 373 aaPredicted RBP17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 SRPX2O60687 465 aaPredicted RBP17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 ULK1O75385 1050 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 CLEC3AO75596 197 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 VIMP08670 466 aaKnown RBP17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 PCNAP12004 261 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 SERPINB3P29508 390 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 PHEXP78562 749 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 ISXQ2M1V0 245 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 TCHHL1Q5QJ38 904 aaPredicted RBP17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 HES3Q5TGS1 186 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 VN1R5Q7Z5H4 357 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 VN1R4Q7Z5H5 301 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 MCATQ8IVS2 390 aaKnown RBP17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 AGBL5Q8NDL9 886 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 RCBTB1Q8NDN9 531 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 TRPV3Q8NET8 790 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 HUS1BQ8NHY5 278 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 ZNF473Q8WTR7 871 aaKnown RBP17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 TWIST2Q8WVJ9 160 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 SELENOMQ8WWX9 145 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 TM4SF19Q96DZ7 209 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 ZNF285Q96NJ3 590 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 FCRL4Q96PJ5 515 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 STRADBQ9C0K7 418 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 SYNPO2LQ9H987 977 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 ENAMQ9NRM1 1142 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 SIDT1Q9NXL6 827 aaKnown RBP17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 PSD3Q9NYI0 1048 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 VTI1BQ9UEU0 232 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 ADAM21Q9UKJ8 722 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 FIS1Q9Y3D6 152 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 DNAJC15Q9Y5T4 150 aa17.1■□□□□ 0.33
SDCBP2-201ENST00000339987 H0YGG7 62 aa17.09■□□□□ 0.33
SDCBP2-201ENST00000339987 HSD3B1P14060 373 aa17.09■□□□□ 0.33
SDCBP2-201ENST00000339987 HSD3B2P26439 372 aa17.09■□□□□ 0.33
SDCBP2-201ENST00000339987 CSTF2P33240 577 aaKnown RBP eCLIP17.09■□□□□ 0.33
SDCBP2-201ENST00000339987 HTR6P50406 440 aa17.09■□□□□ 0.33
SDCBP2-201ENST00000339987 ARF3P61204 181 aaPredicted RBP17.09■□□□□ 0.33
SDCBP2-201ENST00000339987 ACY1Q03154 408 aa17.09■□□□□ 0.33
SDCBP2-201ENST00000339987 PWP1Q13610 501 aa17.09■□□□□ 0.33
SDCBP2-201ENST00000339987 C16orf72Q14CZ0 275 aa17.09■□□□□ 0.33
SDCBP2-201ENST00000339987 FAM219BQ5XKK7 198 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms