RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 C10orf62Q5T681 223 aaPredicted RBP10.68□□□□□ -0.7
LRP1-202ENST00000338962 ADNP2Q6IQ32 1131 aa10.68□□□□□ -0.7
LRP1-202ENST00000338962 UGT2A3Q6UWM9 527 aa10.68□□□□□ -0.7
LRP1-202ENST00000338962 XKR5Q6UX68 686 aa10.68□□□□□ -0.7
LRP1-202ENST00000338962 FAM83HQ6ZRV2 1179 aaPredicted RBP10.68□□□□□ -0.7
LRP1-202ENST00000338962 MSANTD1Q6ZTZ1 278 aa10.68□□□□□ -0.7
LRP1-202ENST00000338962 PDZD3Q86UT5 571 aa10.68□□□□□ -0.7
LRP1-202ENST00000338962 MSRB3Q8IXL7 192 aa10.68□□□□□ -0.7
LRP1-202ENST00000338962 STARD8Q92502 1023 aa10.68□□□□□ -0.7
LRP1-202ENST00000338962 FIG4Q92562 907 aa10.68□□□□□ -0.7
LRP1-202ENST00000338962 RAD51AP1Q96B01 352 aa10.68□□□□□ -0.7
LRP1-202ENST00000338962 BIRC7Q96CA5 298 aa10.68□□□□□ -0.7
LRP1-202ENST00000338962 EFCAB11Q9BUY7 163 aa10.68□□□□□ -0.7
LRP1-202ENST00000338962 SGPP1Q9BX95 441 aa10.68□□□□□ -0.7
LRP1-202ENST00000338962 LGR4Q9BXB1 951 aa10.68□□□□□ -0.7
LRP1-202ENST00000338962 OSBPL11Q9BXB4 747 aa10.68□□□□□ -0.7
LRP1-202ENST00000338962 PAIP1Q9H074 479 aaKnown RBP10.68□□□□□ -0.7
LRP1-202ENST00000338962 OR52A5Q9H2C5 316 aa10.68□□□□□ -0.7
LRP1-202ENST00000338962 WDR26Q9H7D7 661 aa10.68□□□□□ -0.7
LRP1-202ENST00000338962 POLMQ9NP87 494 aaPredicted RBP10.68□□□□□ -0.7
LRP1-202ENST00000338962 SERGEFQ9UGK8 458 aa10.68□□□□□ -0.7
LRP1-202ENST00000338962 PCYT1BQ9Y5K3 369 aaPredicted RBP10.68□□□□□ -0.7
LRP1-202ENST00000338962 TRBV5-3A0A0A0MS03 114 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 ELOVL7A1L3X0 281 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 PABPC4LP0CB38 370 aaKnown RBP10.67□□□□□ -0.7
LRP1-202ENST00000338962 CCT8P50990 548 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 SRSF11Q05519 484 aaKnown RBP10.67□□□□□ -0.7
LRP1-202ENST00000338962 E2F2Q14209 437 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 SLBPQ14493 270 aaKnown RBP eCLIP10.67□□□□□ -0.7
LRP1-202ENST00000338962 GTDC1Q4AE62 458 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 SPIN4Q56A73 249 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 CATSPEREQ5SY80 951 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 INTS11Q5TA45 600 aaKnown RBP10.67□□□□□ -0.7
LRP1-202ENST00000338962 OR4F3Q6IEY1 312 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 GCNT7Q6ZNI0 430 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 DCUN1D3Q8IWE4 304 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 PAPD5Q8NDF8 572 aaKnown RBP10.67□□□□□ -0.7
LRP1-202ENST00000338962 ZNF548Q8NEK5 533 aaPredicted RBP10.67□□□□□ -0.7
LRP1-202ENST00000338962 NCSTNQ92542 709 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 AURKBQ96GD4 344 aaPredicted RBP10.67□□□□□ -0.7
LRP1-202ENST00000338962 MRGPRX1Q96LB2 322 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 RNF145Q96MT1 663 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 SLC29A1Q99808 456 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 TBCDQ9BTW9 1192 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 ZDHHC5Q9C0B5 715 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 KAT8Q9H7Z6 458 aaKnown RBP10.67□□□□□ -0.7
LRP1-202ENST00000338962 SLC6A13Q9NSD5 602 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 EBF1Q9UH73 591 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 C7orf72A4D263 438 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 K7ESF4 209 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 SOCS2O14508 198 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 SH3BGRLO75368 114 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 ETHE1O95571 254 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 LDLRP01130 860 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 RPN2P04844 631 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 GSNP06396 782 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 CDH1P12830 882 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 COX7A2P14406 83 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 HIST2H2ACQ16777 129 aaPredicted RBP10.67□□□□□ -0.7
LRP1-202ENST00000338962 CNPY1Q3B7I2 92 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 FAM98BQ52LJ0 330 aaKnown RBP10.67□□□□□ -0.7
LRP1-202ENST00000338962 FOXB2Q5VYV0 432 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 ATG9BQ674R7 924 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 ZNF776Q68DI1 518 aaPredicted RBP10.67□□□□□ -0.7
LRP1-202ENST00000338962 HIST2H2AA3Q6FI13 130 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 PPP4R4Q6NUP7 873 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 C1orf210Q8IVY1 113 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 PHACTR4Q8IZ21 702 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 CBR4Q8N4T8 237 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 C1orf52Q8N6N3 182 aaKnown RBP10.67□□□□□ -0.7
LRP1-202ENST00000338962 PACRGLQ8N7B6 248 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 GANCQ8TET4 914 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 SLC5A11Q8WWX8 675 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 TFGQ92734 400 aaPredicted RBP10.67□□□□□ -0.7
LRP1-202ENST00000338962 NELL1Q92832 810 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 C11orf24Q96F05 449 aaPredicted RBP10.67□□□□□ -0.7
LRP1-202ENST00000338962 HHIPQ96QV1 700 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 PANX1Q96RD7 426 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 INPP5KQ9BT40 448 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 C9orf16Q9BUW7 83 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 REXO4Q9GZR2 422 aaKnown RBP10.67□□□□□ -0.7
LRP1-202ENST00000338962 EPB41L1Q9H4G0 881 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 EHD1Q9H4M9 534 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 GORASP2Q9H8Y8 452 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 PRMT8Q9NR22 394 aaPredicted RBP10.67□□□□□ -0.7
LRP1-202ENST00000338962 OAZ3Q9UMX2 235 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 SCML1Q9UN30 329 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 OR1A2Q9Y585 309 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 NUMA1Q14980 2115 aa10.67□□□□□ -0.7
LRP1-202ENST00000338962 RNF103-CHMP3A0A140T963 221 aa10.66□□□□□ -0.7
LRP1-202ENST00000338962 GNG14A0A1W2PPG7 69 aa10.66□□□□□ -0.7
LRP1-202ENST00000338962 PIPSLA2A3N6 862 aa10.66□□□□□ -0.7
LRP1-202ENST00000338962 PRR23AA6NEV1 266 aa10.66□□□□□ -0.7
LRP1-202ENST00000338962 MT-ND1P03886 318 aa10.66□□□□□ -0.7
LRP1-202ENST00000338962 ANXA4P09525 319 aaPredicted RBP10.66□□□□□ -0.7
LRP1-202ENST00000338962 C1GALT1C1LP0DN25 315 aa10.66□□□□□ -0.7
LRP1-202ENST00000338962 GABRG2P18507 467 aa10.66□□□□□ -0.7
LRP1-202ENST00000338962 KELP23276 732 aa10.66□□□□□ -0.7
LRP1-202ENST00000338962 ASMTP46597 345 aa10.66□□□□□ -0.7
LRP1-202ENST00000338962 NUBP1P53384 320 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms