RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 PIM1P11309 404 aaPredicted RBP14.51□□□□□ -0.09
PRKN-201ENST00000338468 CASRP41180 1078 aa14.51□□□□□ -0.09
PRKN-201ENST00000338468 KCNC1P48547 511 aa14.51□□□□□ -0.09
PRKN-201ENST00000338468 MEF2AQ02078 507 aaPredicted RBP14.51□□□□□ -0.09
PRKN-201ENST00000338468 TGFBIQ15582 683 aa14.51□□□□□ -0.09
PRKN-201ENST00000338468 SHISA6Q6ZSJ9 500 aa14.51□□□□□ -0.09
PRKN-201ENST00000338468 THOC6Q86W42 341 aaKnown RBP14.51□□□□□ -0.09
PRKN-201ENST00000338468 RAB43Q86YS6 212 aa14.51□□□□□ -0.09
PRKN-201ENST00000338468 KLHDC8AQ8IYD2 350 aa14.51□□□□□ -0.09
PRKN-201ENST00000338468 SHISA5Q8N114 240 aa14.51□□□□□ -0.09
PRKN-201ENST00000338468 LRRN4CLQ8ND94 238 aa14.51□□□□□ -0.09
PRKN-201ENST00000338468 ZNF740Q8NDX6 193 aa14.51□□□□□ -0.09
PRKN-201ENST00000338468 RHBDF1Q96CC6 855 aa14.51□□□□□ -0.09
PRKN-201ENST00000338468 THAP11Q96EK4 314 aa14.51□□□□□ -0.09
PRKN-201ENST00000338468 MVB12AQ96EY5 273 aa14.51□□□□□ -0.09
PRKN-201ENST00000338468 FMO2Q99518 471 aa14.51□□□□□ -0.09
PRKN-201ENST00000338468 MESP1Q9BRJ9 268 aa14.51□□□□□ -0.09
PRKN-201ENST00000338468 SARGQ9BW04 601 aa14.51□□□□□ -0.09
PRKN-201ENST00000338468 CDC42EP4Q9H3Q1 356 aaKnown RBP14.51□□□□□ -0.09
PRKN-201ENST00000338468 SOX17Q9H6I2 414 aaPredicted RBP14.51□□□□□ -0.09
PRKN-201ENST00000338468 MLXIPLQ9NP71 852 aa14.51□□□□□ -0.09
PRKN-201ENST00000338468 MTRF1LQ9UGC7 380 aaKnown RBP14.51□□□□□ -0.09
PRKN-201ENST00000338468 ANAPC2Q9UJX6 822 aa14.51□□□□□ -0.09
PRKN-201ENST00000338468 SLC22A14Q9Y267 594 aa14.51□□□□□ -0.09
PRKN-201ENST00000338468 SPTAN1Q13813 2472 aaKnown RBP14.51□□□□□ -0.09
PRKN-201ENST00000338468 PABPN1LA6NDY0 278 aaKnown RBP14.5□□□□□ -0.09
PRKN-201ENST00000338468 MKRN2OSH3BPM6 223 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 MASP2O00187 686 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 TXNDC9O14530 226 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 FFAR3O14843 346 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 GPR42O15529 346 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 TAPBPO15533 448 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 ANXA5P08758 320 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 SLC26A3P40879 764 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 GDF5P43026 501 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 SLC6A12P48065 614 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 CCL11P51671 97 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 CCR8P51685 355 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 BMPR2Q13873 1038 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 DSG2Q14126 1118 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 CSHL1Q14406 222 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 LACTB2Q53H82 288 aaPredicted RBP14.5□□□□□ -0.09
PRKN-201ENST00000338468 TMEM214Q6NUQ4 689 aaKnown RBP14.5□□□□□ -0.09
PRKN-201ENST00000338468 TCTN3Q6NUS6 607 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 PRSS41Q7RTY9 318 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 CEP112Q8N8E3 955 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 MFSD9Q8NBP5 474 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 STT3BQ8TCJ2 826 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 SLC5A11Q8WWX8 675 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 MRRFQ96E11 262 aaKnown RBP14.5□□□□□ -0.09
PRKN-201ENST00000338468 TSNARE1Q96NA8 513 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 TMEM79Q9BSE2 394 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 ACSS3Q9H6R3 686 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 ACSS2Q9NR19 701 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 IGSF5Q9NSI5 407 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 P4HTMQ9NXG6 502 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 MYO9AB2RTY4 2548 aa14.5□□□□□ -0.09
PRKN-201ENST00000338468 A0A0A6YYC8 382 aaPredicted RBP14.49□□□□□ -0.09
PRKN-201ENST00000338468 CLEC18AA5D8T8 446 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 NCF1BA6NI72 391 aaPredicted RBP14.49□□□□□ -0.09
PRKN-201ENST00000338468 NCF1CA8MVU1 366 aaPredicted RBP14.49□□□□□ -0.09
PRKN-201ENST00000338468 I3L1I5 382 aaPredicted RBP14.49□□□□□ -0.09
PRKN-201ENST00000338468 SOCS6O14544 535 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 ZGLP1P0C6A0 271 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 NCF1P14598 390 aaPredicted RBP14.49□□□□□ -0.09
PRKN-201ENST00000338468 FBLP22087 321 aaKnown RBP14.49□□□□□ -0.09
PRKN-201ENST00000338468 MMP11P24347 488 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 HNMTP50135 292 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 EFNA3P52797 238 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 ATP6V0D1P61421 351 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 KLC1Q07866 573 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 FAM53BQ14153 422 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 SLMAPQ14BN4 828 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 IGFBP7Q16270 282 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 SYT16Q17RD7 645 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 VWA2Q5GFL6 755 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 CLEC18BQ6UXF7 455 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 MED25Q71SY5 747 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 ASPGQ86U10 573 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 LAPTM4BQ86VI4 370 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 GPSM1Q86YR5 675 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 FAM26EQ8N5C1 309 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 TMEM102Q8N9M5 508 aaPredicted RBP14.49□□□□□ -0.09
PRKN-201ENST00000338468 KCT2Q8NC54 265 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 CLEC18CQ8NCF0 446 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 KIAA1191Q96A73 305 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 MOCOSQ96EN8 888 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 IP6K3Q96PC2 410 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 CYTH2Q99418 400 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 EGFL8Q99944 293 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 DRC3Q9H069 523 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 ZNF282Q9UDV7 671 aaPredicted RBP14.49□□□□□ -0.09
PRKN-201ENST00000338468 NXT1Q9UKK6 140 aaKnown RBP14.49□□□□□ -0.09
PRKN-201ENST00000338468 CDC14AQ9UNH5 594 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 PCDHGA9Q9Y5G4 932 aaKnown RBP14.49□□□□□ -0.09
PRKN-201ENST00000338468 HS3ST3B1Q9Y662 390 aa14.49□□□□□ -0.09
PRKN-201ENST00000338468 TNRC6AQ8NDV7 1962 aaKnown RBP14.49□□□□□ -0.09
PRKN-201ENST00000338468 NUP210LQ5VU65 1888 aa14.48□□□□□ -0.09
PRKN-201ENST00000338468 NOTCH2Q04721 2471 aa14.48□□□□□ -0.09
PRKN-201ENST00000338468 TRBC2A0A5B9 178 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms