RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 RAP2AP10114 183 aa14.54□□□□□ -0.08
C9orf47-201ENST00000334490 MYOGP15173 224 aa14.54□□□□□ -0.08
C9orf47-201ENST00000334490 TBPL1P62380 186 aa14.54□□□□□ -0.08
C9orf47-201ENST00000334490 TARDBPQ13148 414 aaKnown RBP eCLIP14.54□□□□□ -0.08
C9orf47-201ENST00000334490 ENPP2Q13822 863 aa14.54□□□□□ -0.08
C9orf47-201ENST00000334490 GANABQ14697 944 aaKnown RBP14.54□□□□□ -0.08
C9orf47-201ENST00000334490 LIPJQ5W064 366 aa14.54□□□□□ -0.08
C9orf47-201ENST00000334490 EPGNQ6UW88 154 aa14.54□□□□□ -0.08
C9orf47-201ENST00000334490 TMEM173Q86WV6 379 aaPredicted RBP14.54□□□□□ -0.08
C9orf47-201ENST00000334490 TPT1P8Q9HAU6 139 aa14.54□□□□□ -0.08
C9orf47-201ENST00000334490 MKKSQ9NPJ1 570 aaPredicted RBP14.54□□□□□ -0.08
C9orf47-201ENST00000334490 HEBP1Q9NRV9 189 aa14.54□□□□□ -0.08
C9orf47-201ENST00000334490 FAM120CQ9NX05 1096 aaKnown RBP14.54□□□□□ -0.08
C9orf47-201ENST00000334490 SSR3Q9UNL2 185 aa14.54□□□□□ -0.08
C9orf47-201ENST00000334490 MYH4Q9Y623 1939 aa14.54□□□□□ -0.08
C9orf47-201ENST00000334490 MYH8P13535 1937 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 A0A0U1RQS6 177 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 CPSF4LA6NMK7 179 aaKnown RBP14.53□□□□□ -0.08
C9orf47-201ENST00000334490 MATN2O00339 956 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 HRH2P25021 359 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 GALK1P51570 392 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 CDK6Q00534 326 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 LASP1Q14847 261 aaKnown RBP14.53□□□□□ -0.08
C9orf47-201ENST00000334490 C16orf72Q14CZ0 275 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 FAM78AQ5JUQ0 283 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 KLHL24Q6TFL4 600 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 TMPRSS11AQ6ZMR5 421 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 RTN4RL1Q86UN2 441 aaPredicted RBP14.53□□□□□ -0.08
C9orf47-201ENST00000334490 ZNF570Q96NI8 536 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 CAMK1GQ96NX5 476 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 SH3GL3Q99963 347 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.53□□□□□ -0.08
C9orf47-201ENST00000334490 RPL5P46777 297 aaKnown RBP14.53□□□□□ -0.08
C9orf47-201ENST00000334490 RABIFP47224 123 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 ZNF267Q14586 743 aaPredicted RBP14.53□□□□□ -0.08
C9orf47-201ENST00000334490 NDUFAF6Q330K2 333 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 DEFB134Q4QY38 66 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 ANKRD33Q7Z3H0 272 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 ASPGQ86U10 573 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 NPAS3Q8IXF0 933 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 OR4K1Q8NGD4 311 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 SLC25A36Q96CQ1 311 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 C1GALT1C1Q96EU7 318 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 ZNF347Q96SE7 839 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 IL26Q9NPH9 171 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 IL17CQ9P0M4 197 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 TJP1Q07157 1748 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 WASH3PC4AMC7 463 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 M0QX08 132 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 ABLIM1O14639 778 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 CXCL12P48061 93 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 SLC6A11P48066 632 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 FAM189BP81408 668 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 DECR1Q16698 335 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 KBTBD8Q8NFY9 601 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 RTP4Q96DX8 246 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 SERINC1Q9NRX5 453 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 TNFRSF10BO14763 440 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 HOXD8P13378 290 aaPredicted RBP14.53□□□□□ -0.08
C9orf47-201ENST00000334490 ABATP80404 500 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 MGAT3Q09327 533 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 KIAA0319Q5VV43 1072 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 ANKRD26P1Q6NSI1 321 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 PHTF2Q8N3S3 785 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 OR5M3Q8NGP4 307 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 SNX33Q8WV41 574 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 PTCHD1Q96NR3 888 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 IFT27Q9BW83 186 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 KLRF1Q9NZS2 232 aa14.53□□□□□ -0.08
C9orf47-201ENST00000334490 F5P12259 2224 aa14.52□□□□□ -0.08
C9orf47-201ENST00000334490 CAPN14A8MX76 684 aa14.52□□□□□ -0.08
C9orf47-201ENST00000334490 SCDO00767 359 aa14.52□□□□□ -0.08
C9orf47-201ENST00000334490 CDC123O75794 336 aaPredicted RBP14.52□□□□□ -0.08
C9orf47-201ENST00000334490 CXCR1P25024 350 aa14.52□□□□□ -0.08
C9orf47-201ENST00000334490 RCVRNP35243 200 aa14.52□□□□□ -0.08
C9orf47-201ENST00000334490 SHHQ15465 462 aa14.52□□□□□ -0.08
C9orf47-201ENST00000334490 KHDC1Q4VXA5 237 aaKnown RBP14.52□□□□□ -0.08
C9orf47-201ENST00000334490 C6orf136Q5SQH8 315 aa14.52□□□□□ -0.08
C9orf47-201ENST00000334490 C10orf62Q5T681 223 aaPredicted RBP14.52□□□□□ -0.08
C9orf47-201ENST00000334490 CYS1Q717R9 158 aa14.52□□□□□ -0.08
C9orf47-201ENST00000334490 OR56A1Q8NGH5 318 aa14.52□□□□□ -0.08
C9orf47-201ENST00000334490 SNRNP27Q8WVK2 155 aaKnown RBP14.52□□□□□ -0.08
C9orf47-201ENST00000334490 OR51V1Q9H2C8 321 aa14.52□□□□□ -0.08
C9orf47-201ENST00000334490 A0A1W2PP18 115 aa14.52□□□□□ -0.08
C9orf47-201ENST00000334490 C6orf47O95873 294 aa14.52□□□□□ -0.08
C9orf47-201ENST00000334490 HOXC12P31275 282 aa14.52□□□□□ -0.08
C9orf47-201ENST00000334490 RANBP1P43487 201 aa14.52□□□□□ -0.08
C9orf47-201ENST00000334490 PLGLB1Q02325 96 aa14.52□□□□□ -0.08
C9orf47-201ENST00000334490 DDI2Q5TDH0 399 aa14.52□□□□□ -0.08
C9orf47-201ENST00000334490 KBTBD2Q8IY47 623 aa14.52□□□□□ -0.08
C9orf47-201ENST00000334490 OR4K14Q8NGD5 310 aa14.52□□□□□ -0.08
C9orf47-201ENST00000334490 ZBP1Q9H171 429 aa14.52□□□□□ -0.08
C9orf47-201ENST00000334490 POLR2J3Q9H1A7 115 aaKnown RBP14.52□□□□□ -0.08
C9orf47-201ENST00000334490 EHD3Q9NZN3 535 aa14.52□□□□□ -0.08
C9orf47-201ENST00000334490 PCDHGA12O60330 932 aa14.52□□□□□ -0.09
C9orf47-201ENST00000334490 ANGPTL1O95841 491 aa14.52□□□□□ -0.09
C9orf47-201ENST00000334490 GJA4P35212 333 aa14.52□□□□□ -0.09
C9orf47-201ENST00000334490 HHEXQ03014 270 aa14.52□□□□□ -0.09
C9orf47-201ENST00000334490 GRIN2CQ14957 1233 aa14.52□□□□□ -0.09
C9orf47-201ENST00000334490 IL22RA1Q8N6P7 574 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms