RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 FAM220BPB1ANY3 271 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 THEGLP0DJG4 465 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 HSPA7P48741 367 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 DIO3P55073 304 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 COLEC12Q5KU26 742 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 CYP2U1Q7Z449 544 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 KRT73Q86Y46 540 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 FAM217AQ8IXS0 508 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 TMEFF1Q8IYR6 380 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 CBARPQ8N350 705 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-201ENST00000334136 GPR156Q8NFN8 814 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 APOLD1Q96LR9 279 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 SLC38A3Q99624 504 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 ATG10Q9H0Y0 220 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 ZNF696Q9H7X3 374 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 IPPKQ9H8X2 491 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 SMURF2Q9HAU4 748 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 SMOXQ9NWM0 555 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 MARCH4Q9P2E8 410 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-201ENST00000334136 GALPQ9UBC7 116 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 WBP4O75554 376 aaKnown RBP11.43□□□□□ -0.58
HDAC6-201ENST00000334136 CISD3P0C7P0 127 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 LINC00271P0C7V0 271 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 BCAP31P51572 246 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 RPS14P62263 151 aaKnown RBP11.43□□□□□ -0.58
HDAC6-201ENST00000334136 NAE1Q13564 534 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 TP53BP2Q13625 1128 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 ZNF423Q2M1K9 1284 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 ZNF542PQ5EBM4 170 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 CDH24Q86UP0 819 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 ZNF683Q8IZ20 524 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 SPEM1Q8N4L4 309 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 GPR26Q8NDV2 337 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 PTGDR2Q9Y5Y4 395 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 KNTC1P50748 2209 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 B4DGG1 531 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 PRAMEF26H0Y7S4 382 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 VEGFDO43915 354 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 OR1I1O60431 355 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 CLPXO76031 633 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 ATXN1LP0C7T5 689 aaKnown RBP11.42□□□□□ -0.58
HDAC6-201ENST00000334136 SF1Q15637 639 aaKnown RBP11.42□□□□□ -0.58
HDAC6-201ENST00000334136 MOGQ16653 247 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 UAP1L1Q3KQV9 507 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 PIGGQ5H8A4 983 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 ZC3H14Q6PJT7 736 aaKnown RBP11.42□□□□□ -0.58
HDAC6-201ENST00000334136 Q6ZS52 159 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 C2CD4AQ8NCU7 369 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-201ENST00000334136 MYDGFQ969H8 173 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 OR2M4Q96R27 311 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 ABCB9Q9NP78 766 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 CDV3Q9UKY7 258 aaKnown RBP11.42□□□□□ -0.58
HDAC6-201ENST00000334136 SOCS2O14508 198 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 LDB2O43679 373 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 AP2A2O94973 939 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 TSPAN19P0C672 248 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 POU2F1P14859 743 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 IMPDH1P20839 514 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 RPS7P62081 194 aaKnown RBP11.42□□□□□ -0.58
HDAC6-201ENST00000334136 C1orf61Q13536 156 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 FNDC1Q4ZHG4 1894 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-201ENST00000334136 PRRT3Q5FWE3 981 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 CAPN13Q6MZZ7 669 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-201ENST00000334136 GPR153Q6NV75 609 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 SLC2A7Q6PXP3 512 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 R3HCC1LQ7Z5L2 792 aaKnown RBP11.42□□□□□ -0.58
HDAC6-201ENST00000334136 ETFBKMTQ8IXQ9 262 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 PDPRQ8NCN5 879 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 DTD2Q96FN9 168 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 DOCK6Q96HP0 2047 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 C8orf4Q9NR00 106 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 ACTR3BQ9P1U1 418 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 RAPGEFL1Q9UHV5 662 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 RPS6KA6Q9UK32 745 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 SHROOM3Q8TF72 1996 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 CABIN1Q9Y6J0 2220 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 CCDC182A6NF36 153 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 DDX5P17844 614 aaKnown RBP11.42□□□□□ -0.58
HDAC6-201ENST00000334136 MAOBP27338 520 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 TALDO1P37837 337 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 CCT3P49368 545 aaKnown RBP11.42□□□□□ -0.58
HDAC6-201ENST00000334136 CLDN2P57739 230 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 UFM1P61960 85 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 MXD1Q05195 221 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 PTPRRQ15256 657 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 SNAP47Q5SQN1 464 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 SLC22A16Q86VW1 577 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 OCEL1Q9H607 264 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 CCNB1IP1Q9NPC3 277 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 RIMKLBQ9ULI2 386 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 ZNF490Q9ULM2 529 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-201ENST00000334136 MRPS7Q9Y2R9 242 aaKnown RBP11.42□□□□□ -0.58
HDAC6-201ENST00000334136 ANK1P16157 1881 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 ZNF99A8MXY4 864 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-201ENST00000334136 PRKD3O94806 890 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 C8GP07360 202 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 RAP2AP10114 183 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 CXCR2P25025 360 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 ACRV1P26436 265 aa11.42□□□□□ -0.58
HDAC6-201ENST00000334136 SLC5A2P31639 672 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms