RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 HDHD5Q9BXW7 423 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 MIXL1Q9H2W2 232 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 EXOSC4Q9NPD3 245 aaKnown RBP12.36□□□□□ -0.43
CCDC60-201ENST00000327554 TMLHEQ9NVH6 421 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 RLIMQ9NVW2 624 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 B3GNT2Q9NY97 397 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 EIF3KQ9UBQ5 218 aaKnown RBP12.36□□□□□ -0.43
CCDC60-201ENST00000327554 TEKT2Q9UIF3 430 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 NUP50Q9UKX7 468 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 VPS4AQ9UN37 437 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 PCDHGB3Q9Y5G1 929 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 E5RI56 91 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 MANBAO00462 879 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 RFXANKO14593 260 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 TLR5O60602 858 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 WDR47O94967 919 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 PSKH1P11801 424 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 COL6A1P12109 1028 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 RORCP51449 518 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 CLCN7P51798 805 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 KCNJ10P78508 379 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.36□□□□□ -0.43
CCDC60-201ENST00000327554 PCDH1Q08174 1060 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 IL10RBQ08334 325 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 SMARCB1Q12824 385 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 CSTF3Q12996 717 aaKnown RBP12.36□□□□□ -0.43
CCDC60-201ENST00000327554 QPRTQ15274 297 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 GPR19Q15760 415 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.36□□□□□ -0.43
CCDC60-201ENST00000327554 TJAP1Q5JTD0 557 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 NADSYN1Q6IA69 706 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 TMC8Q8IU68 726 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 CPA6Q8N4T0 437 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 MDGA1Q8NFP4 955 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 CHTF18Q8WVB6 975 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 DPH2Q9BQC3 489 aaPredicted RBP12.36□□□□□ -0.43
CCDC60-201ENST00000327554 TRAF4Q9BUZ4 470 aaPredicted RBP12.36□□□□□ -0.43
CCDC60-201ENST00000327554 GTPBP2Q9BX10 602 aaKnown RBP12.36□□□□□ -0.43
CCDC60-201ENST00000327554 ZYG11BQ9C0D3 744 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 SNTG1Q9NSN8 517 aa12.36□□□□□ -0.43
CCDC60-201ENST00000327554 IQCMA0A1B0GVH7 501 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 AGRPO00253 132 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 TRIM3O75382 744 aaPredicted RBP12.35□□□□□ -0.43
CCDC60-201ENST00000327554 SCO1O75880 301 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 CTRB1P17538 263 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 TACR1P25103 407 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 GDF5P43026 501 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 VEPH1Q14D04 833 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 PCBP1Q15365 356 aaKnown RBP eCLIP12.35□□□□□ -0.43
CCDC60-201ENST00000327554 TATDN3Q17R31 274 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 CTRB2Q6GPI1 263 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 ERICH5Q6P6B1 374 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 FAM131AQ6UXB0 335 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 GPR155Q7Z3F1 870 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 UBE2J2Q8N2K1 259 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 USP7Q93009 1102 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 TPD52L3Q96J77 140 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 HHIPQ96QV1 700 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 NMUR1Q9HB89 426 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 ALG5Q9Y673 324 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 TMEM229AB2RXF0 380 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 CLIC1O00299 241 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 ENGP17813 658 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 PSMA3P25788 255 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 FAM189BP81408 668 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 TAGLNQ01995 201 aaKnown RBP12.35□□□□□ -0.43
CCDC60-201ENST00000327554 LARS2Q15031 903 aaKnown RBP12.35□□□□□ -0.43
CCDC60-201ENST00000327554 PXDC1Q5TGL8 231 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 OVOS1Q6IE37 1185 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 SDR16C5Q8N3Y7 309 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 TTC16Q8NEE8 873 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 UTP15Q8TED0 518 aaKnown RBP12.35□□□□□ -0.43
CCDC60-201ENST00000327554 TSSK3Q96PN8 268 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 C1QTNF7Q9BXJ2 289 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 TMEM245Q9H330 911 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 ABCB9Q9NP78 766 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 SLC23A1Q9UHI7 598 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 DUSP12Q9UNI6 340 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 VPS9D1Q9Y2B5 631 aa12.35□□□□□ -0.43
CCDC60-201ENST00000327554 ZNF670-ZNF695F2Z2N8 137 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 SMLR1H3BR10 107 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 TRIM77I1YAP6 450 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 GPR182O15218 404 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 GUCA1CO95843 209 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 GLUD1P00367 558 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 SCG5P05408 212 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 GSTM1P09488 218 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 GPX2P18283 190 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 GPC1P35052 558 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 ACVRL1P37023 503 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 CRYBB2P43320 205 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 TTPAP49638 278 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 CLCN4P51793 760 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 POU6F2P78424 691 aaPredicted RBP12.34□□□□□ -0.43
CCDC60-201ENST00000327554 PPIGQ13427 754 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCDC60-201ENST00000327554 SERINC3Q13530 473 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 DMC1Q14565 340 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 GLT6D1Q7Z4J2 308 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 GDPD1Q8N9F7 314 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 OR10G2Q8NGC3 310 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms